RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 PCDHB15Q9Y5E8 787 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 MYH7P12883 1935 aa9.6□□□□□ -0.87
UBE2D3-222ENST00000508238 MYPNQ86TC9 1320 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 SMARCA5O60264 1052 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 EN2P19622 333 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 PRKCZQ05513 592 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 ABCB5Q2M3G0 1257 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 SHROOM1Q2M3G4 852 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 ZSCAN25Q6NSZ9 544 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 LCORLQ8N3X6 602 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 SH3TC2Q8TF17 1288 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 KIAA1683Q9H0B3 1180 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 MCM9Q9NXL9 1143 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 GTF3C3Q9Y5Q9 886 aa9.59□□□□□ -0.87
UBE2D3-222ENST00000508238 TNPO2O14787 897 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 GJB1P08034 283 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 CAPN2P17655 700 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 GUCY1A2P33402 732 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 GCGRP47871 477 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 FLT3LGP49771 235 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 USP14P54578 494 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 RRP1P56182 461 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 IRX3P78415 501 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 SLC4A8Q2Y0W8 1093 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 PRPF38BQ5VTL8 546 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 GTF3C2Q8WUA4 911 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 SDR42E1Q8WUS8 393 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 WNT2BQ93097 391 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 COA7Q96BR5 231 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 GPATCH3Q96I76 525 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 P2RX7Q99572 595 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 ARMT1Q9H993 441 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 CABP5Q9NP86 173 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 SWAP70Q9UH65 585 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 GJD2Q9UKL4 321 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 GABRQQ9UN88 632 aa9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 DDX60LQ5H9U9 1706 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 BAZ2AQ9UIF9 1905 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-222ENST00000508238 ADCY3O60266 1144 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 MBD4O95243 580 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 HERVK_113P62684 666 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 AAMPQ13685 434 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 SLFNL1Q499Z3 407 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 C12orf60Q5U649 245 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 KBTBD3Q8NAB2 608 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 GPRC5AQ8NFJ5 357 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 NKX2-3Q8TAU0 364 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 BCL11AQ9H165 835 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 GOPCQ9HD26 462 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 RBPJLQ9UBG7 517 aa9.57□□□□□ -0.88
UBE2D3-222ENST00000508238 TTC41PQ6P2S7 1318 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 NAV1Q8NEY1 1877 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L15C9J2P7 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L13C9JLJ4 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L11C9JVI0 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L18D6R9N7 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L22D6RA61 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L17D6RBQ6 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L19D6RCP7 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L20D6RJB6 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 PRKAB2O43741 272 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 KDM4AO75164 1064 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 ZFYP08048 801 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 GJA8P48165 433 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 UBXN2AP68543 259 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L24Q0WX57 530 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 RAB3GAP1Q15042 981 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 MTFR1Q15390 333 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 GIMAP6Q6P9H5 292 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 LBX2Q6XYB7 198 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 CATSPERGQ6ZRH7 1159 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 TMEM179Q6ZVK1 233 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 ACER1Q8TDN7 264 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 CCDC17Q96LX7 622 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 STRBPQ96SI9 672 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 PUS7LQ9H0K6 701 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 TXNRD2Q9NNW7 524 aa9.56□□□□□ -0.88
UBE2D3-222ENST00000508238 MYH8P13535 1937 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 USP17L21D6R901 530 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 ERC2O15083 957 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 RNF113AO15541 343 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 CHGBP05060 677 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 CFHP08603 1231 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 CYP2D6P10635 497 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 XRCC5P13010 732 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 CCL5P13501 91 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 VCAM1P19320 739 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 MAPK4P31152 587 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 HDAC1Q13547 482 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 SEPT2Q15019 361 aa9.55□□□□□ -0.88
UBE2D3-222ENST00000508238 LRRFIP1Q32MZ4 808 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms