RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 ADGRA1Q86SQ6 560 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 FOXP4Q8IVH2 680 aaPredicted RBP13.75□□□□□ -0.21
CAST-221ENST00000508197 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 LPAR1Q92633 364 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 NEUROD6Q96NK8 337 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 MEIS3Q99687 375 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 RAI14Q9P0K7 980 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 TTC28Q96AY4 2481 aa13.75□□□□□ -0.21
CAST-221ENST00000508197 PRUNE2Q8WUY3 3088 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 MCAMP43121 646 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 GSTO1P78417 241 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 GJC2Q5T442 439 aaPredicted RBP13.74□□□□□ -0.21
CAST-221ENST00000508197 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 MAPKAPK5Q8IW41 473 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 CCAR1Q8IX12 1150 aaKnown RBP13.74□□□□□ -0.21
CAST-221ENST00000508197 TGFBRAP1Q8WUH2 860 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 BADQ92934 168 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 DHX36Q9H2U1 1008 aaKnown RBP13.74□□□□□ -0.21
CAST-221ENST00000508197 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
CAST-221ENST00000508197 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
CAST-221ENST00000508197 DNM1LO00429 736 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 HOXC6P09630 235 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 ITGB8P26012 769 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 ARID4AP29374 1257 aaPredicted RBP13.73□□□□□ -0.21
CAST-221ENST00000508197 CNGA1P29973 690 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 MFSD14CQ5VZR4 134 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 SLC39A5Q6ZMH5 540 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 FAM217BQ9NTX9 383 aaPredicted RBP13.73□□□□□ -0.21
CAST-221ENST00000508197 BTBD7Q9P203 1132 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 AKAP2Q9Y2D5 859 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 ATP11BQ9Y2G3 1177 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
CAST-221ENST00000508197 CDH23Q9H251 3354 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 SIPA1L1O43166 1804 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 ANO1Q5XXA6 986 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 USP17L2Q6R6M4 530 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
CAST-221ENST00000508197 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 TMUB1Q9BVT8 246 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 LRP2BPQ9P2M1 347 aa13.72□□□□□ -0.21
CAST-221ENST00000508197 NOB1Q9ULX3 412 aaKnown RBP13.72□□□□□ -0.21
CAST-221ENST00000508197 ATAD5Q96QE3 1844 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 FLT1P17948 1338 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 DNAH12Q6ZR08 3092 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 ADH1BP00325 375 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 GH2P01242 217 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 CYBAP13498 195 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 EPHB4P54760 987 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.21
CAST-221ENST00000508197 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 SLFN5Q08AF3 891 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 GRB14Q14449 540 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 SNX17Q15036 470 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 AMHR2Q16671 573 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 CATSPERGQ6ZRH7 1159 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 USP38Q8NB14 1042 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 GTF3C2Q8WUA4 911 aaPredicted RBP13.71□□□□□ -0.21
CAST-221ENST00000508197 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 GINM1Q9NU53 330 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 PRKAG2Q9UGJ0 569 aa13.71□□□□□ -0.21
CAST-221ENST00000508197 USP17L15C9J2P7 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L13C9JLJ4 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L11C9JVI0 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L18D6R9N7 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L22D6RA61 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L17D6RBQ6 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L19D6RCP7 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L20D6RJB6 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 MSCO60682 206 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 USP17L24Q0WX57 530 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 ZYXQ15942 572 aaKnown RBP13.7□□□□□ -0.22
CAST-221ENST00000508197 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 PRAMEF19Q5SWL8 479 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 WDR78Q5VTH9 848 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 ACER1Q8TDN7 264 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 PRDM5Q9NQX1 630 aaPredicted RBP13.7□□□□□ -0.22
CAST-221ENST00000508197 PDLIM7Q9NR12 457 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 SAP30BPQ9UHR5 308 aaKnown RBP13.7□□□□□ -0.22
CAST-221ENST00000508197 RAPGEFL1Q9UHV5 662 aa13.7□□□□□ -0.22
CAST-221ENST00000508197 E9PSI1 815 aa13.69□□□□□ -0.22
CAST-221ENST00000508197 KDM4AO75164 1064 aa13.69□□□□□ -0.22
CAST-221ENST00000508197 FOSL2P15408 326 aa13.69□□□□□ -0.22
CAST-221ENST00000508197 DYNLL1P63167 89 aaKnown RBP13.69□□□□□ -0.22
CAST-221ENST00000508197 MTX1Q13505 466 aa13.69□□□□□ -0.22
CAST-221ENST00000508197 GRIN2CQ14957 1233 aa13.69□□□□□ -0.22
CAST-221ENST00000508197 NAA16Q6N069 864 aaPredicted RBP13.69□□□□□ -0.22
CAST-221ENST00000508197 TATDN1Q6P1N9 297 aa13.69□□□□□ -0.22
CAST-221ENST00000508197 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
CAST-221ENST00000508197 CRACR2BQ8N4Y2 399 aaPredicted RBP13.69□□□□□ -0.22
CAST-221ENST00000508197 REPIN1Q9BWE0 567 aaKnown RBP13.69□□□□□ -0.22
CAST-221ENST00000508197 MAST2Q6P0Q8 1798 aa13.68□□□□□ -0.22
CAST-221ENST00000508197 COBLO75128 1261 aa13.68□□□□□ -0.22
CAST-221ENST00000508197 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
CAST-221ENST00000508197 BAG3O95817 575 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms