RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 TMTC2Q8N394 836 aa10.56□□□□□ -0.72
SMAD1-207ENST00000507594 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
SMAD1-207ENST00000507594 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
SMAD1-207ENST00000507594 TTC14Q96N46 770 aa10.56□□□□□ -0.72
SMAD1-207ENST00000507594 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
SMAD1-207ENST00000507594 MYL10Q9BUA6 226 aa10.56□□□□□ -0.72
SMAD1-207ENST00000507594 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
SMAD1-207ENST00000507594 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMAD1-207ENST00000507594 LY9Q9HBG7 655 aa10.56□□□□□ -0.72
SMAD1-207ENST00000507594 FRMPD2Q68DX3 1309 aaPredicted RBP10.56□□□□□ -0.72
SMAD1-207ENST00000507594 C19orf81C9J6K1 198 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 ZBTB43O43298 467 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 SLC10A3P09131 477 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
SMAD1-207ENST00000507594 CALM1P0DP23 149 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 CALM2P0DP24 149 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 CALM3P0DP25 149 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 ZBTB48P10074 688 aaPredicted RBP10.55□□□□□ -0.72
SMAD1-207ENST00000507594 CETPP11597 493 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 RXRAP19793 462 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 METAP2P50579 478 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMAD1-207ENST00000507594 BACE1P56817 501 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 EXOSC10Q01780 885 aaKnown RBP10.55□□□□□ -0.72
SMAD1-207ENST00000507594 PABPC4Q13310 644 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMAD1-207ENST00000507594 DGKZQ13574 1117 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 SPRYD7Q5W111 196 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
SMAD1-207ENST00000507594 CAPNS2Q96L46 248 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 MTA3Q9BTC8 594 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 VCPKMTQ9H867 229 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 DAXXQ9UER7 740 aaPredicted RBP10.55□□□□□ -0.72
SMAD1-207ENST00000507594 AFG3L2Q9Y4W6 797 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 PHIPQ8WWQ0 1821 aa10.55□□□□□ -0.72
SMAD1-207ENST00000507594 A0A1W2PRG0 241 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 MANSC4A6NHS7 340 aaPredicted RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 F5H6K3 240 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 CXCL11O14625 94 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 DDAH1O94760 285 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 NDUFB10O96000 172 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 BMP3P12645 472 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 HSPA6P17066 643 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 KIF5BP33176 963 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 GJA5P36382 358 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 ANP32AP39687 249 aaKnown RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 LIFRP42702 1097 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 KLRC3Q07444 240 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 SREBF2Q12772 1141 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 CAMK2BQ13554 666 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 SEC23AQ15436 765 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 RTN1Q16799 776 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 FAM83BQ5T0W9 1011 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 OTUD7BQ6GQQ9 843 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 IGDCC4Q8TDY8 1250 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 NUP88Q99567 741 aaPredicted RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 KIAA1683Q9H0B3 1180 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 RPAP3Q9H6T3 665 aaPredicted RBP10.54□□□□□ -0.72
SMAD1-207ENST00000507594 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 TMX2Q9Y320 296 aa10.54□□□□□ -0.72
SMAD1-207ENST00000507594 PTPRFP10586 1907 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 CPLX1O14810 134 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 WDR46O15213 610 aaKnown RBP10.53□□□□□ -0.72
SMAD1-207ENST00000507594 AOC2O75106 756 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 FLOT1O75955 427 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 HSP90AA1P07900 732 aaKnown RBP10.53□□□□□ -0.72
SMAD1-207ENST00000507594 GOLGA8HP0CJ92 632 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 VCAM1P19320 739 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 OSBPP22059 807 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 CCT2P78371 535 aaKnown RBP10.53□□□□□ -0.72
SMAD1-207ENST00000507594 NOGQ13253 232 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 TOB2Q14106 344 aaPredicted RBP10.53□□□□□ -0.72
SMAD1-207ENST00000507594 RCSD1Q6JBY9 416 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
SMAD1-207ENST00000507594 KCTD1Q719H9 257 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 RASGRP2Q7LDG7 609 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 PIP4P2Q8N4L2 257 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 GMCL1P1Q8NEA9 526 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 LPAR1Q92633 364 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 HHIPL1Q96JK4 782 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 PNMA3Q9UL41 463 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 KCNH4Q9UQ05 1017 aa10.53□□□□□ -0.72
SMAD1-207ENST00000507594 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.73
SMAD1-207ENST00000507594 RASSF10A6NK89 507 aa10.52□□□□□ -0.73
SMAD1-207ENST00000507594 TMEM232C9JQI7 657 aa10.52□□□□□ -0.73
SMAD1-207ENST00000507594 SLC4A3P48751 1232 aa10.52□□□□□ -0.73
SMAD1-207ENST00000507594 MCM2P49736 904 aa10.52□□□□□ -0.73
SMAD1-207ENST00000507594 AKAP17AQ02040 695 aaKnown RBP10.52□□□□□ -0.73
SMAD1-207ENST00000507594 KIF23Q02241 960 aaPredicted RBP10.52□□□□□ -0.73
SMAD1-207ENST00000507594 ASPRV1Q53RT3 343 aa10.52□□□□□ -0.73
SMAD1-207ENST00000507594 APOA5Q6Q788 366 aa10.52□□□□□ -0.73
SMAD1-207ENST00000507594 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.73
SMAD1-207ENST00000507594 SGMS1Q86VZ5 419 aa10.52□□□□□ -0.73
SMAD1-207ENST00000507594 PROCA1Q8NCQ7 364 aaPredicted RBP10.52□□□□□ -0.73
SMAD1-207ENST00000507594 SMCR8Q8TEV9 937 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms