RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 ABCC11Q96J66 1382 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 CCDC162PA2VCL2 907 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 KCNJ6P48051 423 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 POLE2P56282 527 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 PDE1BQ01064 536 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 PPFIA1Q13136 1202 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 BCL2A1Q16548 175 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 LMBRD2Q68DH5 695 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 LLGL2Q6P1M3 1020 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 RSRC2Q7L4I2 434 aaKnown RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 JAKMIP1Q96N16 626 aaKnown RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 RPS6KC1Q96S38 1066 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 H0Y3Z8 333 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 PHACTR2O75167 634 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 FLOT1O75955 427 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 TUBBP07437 444 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 CD53P19397 219 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 PDE6CP51160 858 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 ETF1P62495 437 aaKnown RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 MSLNQ13421 630 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 SGSM1Q2NKQ1 1148 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 NLRP9Q7RTR0 991 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 LURAP1LQ8IV03 231 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 ARL6IP6Q8N6S5 226 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 PPP1R14CQ8TAE6 165 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 ZNF180Q9UJW8 692 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 L1RE1Q9UN81 338 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 ARIH1Q9Y4X5 557 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 SH3TC1Q8TE82 1336 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 DNMBPQ6XZF7 1577 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 N4BP3O15049 544 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 SNX2O60749 519 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 USO1O60763 962 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 HSPA4P34932 840 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 AARSP49588 968 aaKnown RBP eCLIP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 RNF187Q5TA31 235 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TBC1D9Q6ZT07 1266 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 CCAR1Q8IX12 1150 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 CKAP2LQ8IYA6 745 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 PAF1Q8N7H5 531 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 WDR60Q8WVS4 1066 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 STAMBPL1Q96FJ0 436 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 MAELQ96JY0 434 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 ZNF570Q96NI8 536 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 UQCC2Q9BRT2 126 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 VIPAS39Q9H9C1 493 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TCF7L2Q9NQB0 619 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 ASAP1Q9ULH1 1129 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 GJA3Q9Y6H8 435 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 CDHR2Q9BYE9 1310 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 URI1O94763 535 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 ANP32DO95626 131 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 UBL4AP11441 157 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 GEMIN4P57678 1058 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 MKRN3Q13064 507 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 NXNQ6DKJ4 435 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 MCM10Q7L590 875 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TRMT2AQ8IZ69 625 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 SPERTQ8NA61 448 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TMEM87AQ8NBN3 555 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 SRPK1Q96SB4 655 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 MOV10L1Q9BXT6 1211 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 MRGBPQ9NV56 204 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 L3MBTL1Q9Y468 752 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 DPPA5A6NC42 116 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 CSPG5O95196 566 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 BNIP1Q12981 228 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 IKQ13123 557 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 SPECC1Q5M775 1068 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TCERG1LQ5VWI1 586 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 PCNX4Q63HM2 1172 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 C3orf67Q6ZVT6 689 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 ZNF75CPQ92670 426 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 SKA1Q96BD8 255 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 CLMNQ96JQ2 1002 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 FGD4Q96M96 766 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TCF12Q99081 682 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 ZHX3Q9H4I2 956 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 KAT14Q9H8E8 782 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 QTRT2Q9H974 415 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 NOD2Q9HC29 1040 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 INIPQ9NRY2 104 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 TYW1Q9NV66 732 aaKnown RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 CFDP1Q9UEE9 299 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-216ENST00000507116 UBN2Q6ZU65 1347 aa6.85□□□□□ -1.31
PDE4D-216ENST00000507116 PRPF6O94906 941 aaKnown RBP6.84□□□□□ -1.31
PDE4D-216ENST00000507116 GSDMDP57764 484 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 USP46P62068 366 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 BYSLQ13895 437 aaKnown RBP6.84□□□□□ -1.31
PDE4D-216ENST00000507116 CASP8Q14790 479 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 CRY1Q16526 586 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 FCHSD1Q86WN1 690 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 HOMER1Q86YM7 354 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 IFT81Q8WYA0 676 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 C8orf76Q96K31 380 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 PPP1R13BQ96KQ4 1090 aa6.84□□□□□ -1.31
PDE4D-216ENST00000507116 C1orf74Q96LT6 269 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms