RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CCDC178Q5BJE1 867 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 LBX2Q6XYB7 198 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 IQCA1Q86XH1 822 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 HOXC10Q9NYD6 342 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 RAD21O60216 631 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 NMT2O60551 498 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 PEX10O60683 326 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 IRF5Q13568 498 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 COG2Q14746 738 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 Q3C1V9 767 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 TTC14Q96N46 770 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 GJD2Q9UKL4 321 aa23.41■■□□□ 1.34
SNX25-204ENST00000506896 RLFQ13129 1914 aa23.4■■□□□ 1.34
SNX25-204ENST00000506896 KDM4AO75164 1064 aa23.4■■□□□ 1.34
SNX25-204ENST00000506896 NDUFB10O96000 172 aa23.4■■□□□ 1.34
SNX25-204ENST00000506896 LRRC47Q8N1G4 583 aaKnown RBP23.4■■□□□ 1.34
SNX25-204ENST00000506896 GPRC5AQ8NFJ5 357 aa23.4■■□□□ 1.34
SNX25-204ENST00000506896 COA7Q96BR5 231 aa23.4■■□□□ 1.34
SNX25-204ENST00000506896 PLXNB2O15031 1838 aa23.4■■□□□ 1.34
SNX25-204ENST00000506896 B4E1Z4 1266 aa23.39■■□□□ 1.33
SNX25-204ENST00000506896 FLOT1O75955 427 aa23.39■■□□□ 1.33
SNX25-204ENST00000506896 ERVK-9P63128 1117 aa23.39■■□□□ 1.33
SNX25-204ENST00000506896 ERVK-24P63145 666 aa23.39■■□□□ 1.33
SNX25-204ENST00000506896 RABGAP1Q9Y3P9 1069 aa23.39■■□□□ 1.33
SNX25-204ENST00000506896 MKI67P46013 3256 aaKnown RBP23.39■■□□□ 1.33
SNX25-204ENST00000506896 CNMDO75829 334 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 TOP1P11387 765 aaKnown RBP23.38■■□□□ 1.33
SNX25-204ENST00000506896 FAM83BQ5T0W9 1011 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 DGKHQ86XP1 1220 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 MB21D1Q8N884 522 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 SLAIN1Q8ND83 568 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 PXYLP1Q8TE99 480 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 TMEM106CQ9BVX2 250 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 ZSWIM5Q9P217 1185 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 PDE4DIPQ5VU43 2346 aa23.38■■□□□ 1.33
SNX25-204ENST00000506896 SPDYE16A6NNV3 312 aaPredicted RBP23.37■■□□□ 1.33
SNX25-204ENST00000506896 ADCY3O60266 1144 aa23.37■■□□□ 1.33
SNX25-204ENST00000506896 NECTIN1Q15223 517 aa23.37■■□□□ 1.33
SNX25-204ENST00000506896 MTFR1Q15390 333 aa23.37■■□□□ 1.33
SNX25-204ENST00000506896 SLFN13Q68D06 897 aa23.37■■□□□ 1.33
SNX25-204ENST00000506896 RALYLQ86SE5 291 aaKnown RBP23.37■■□□□ 1.33
SNX25-204ENST00000506896 NCOA7Q8NI08 942 aa23.37■■□□□ 1.33
SNX25-204ENST00000506896 GMCL1Q96IK5 515 aa23.37■■□□□ 1.33
SNX25-204ENST00000506896 E7EWF7 191 aa23.36■■□□□ 1.33
SNX25-204ENST00000506896 REC8O95072 547 aa23.36■■□□□ 1.33
SNX25-204ENST00000506896 EN2P19622 333 aaPredicted RBP23.36■■□□□ 1.33
SNX25-204ENST00000506896 DSG3P32926 999 aa23.36■■□□□ 1.33
SNX25-204ENST00000506896 ZSCAN10Q96SZ4 725 aaPredicted RBP23.36■■□□□ 1.33
SNX25-204ENST00000506896 TMEM47Q9BQJ4 181 aa23.36■■□□□ 1.33
SNX25-204ENST00000506896 UBAC1Q9BSL1 405 aa23.36■■□□□ 1.33
SNX25-204ENST00000506896 SLC27A2O14975 620 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 CCNA1P78396 465 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 CREB3L3Q68CJ9 461 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 RCSD1Q6JBY9 416 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 NKX2-3Q8TAU0 364 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 ANKS1AQ92625 1134 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 PAGR1Q9BTK6 254 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 PORCNQ9H237 461 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 FEM1BQ9UK73 627 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 PPP1R9AQ9ULJ8 1098 aa23.35■■□□□ 1.33
SNX25-204ENST00000506896 PARP14Q460N5 1801 aa23.34■■□□□ 1.33
SNX25-204ENST00000506896 MYCP01106 439 aaPredicted RBP23.34■■□□□ 1.33
SNX25-204ENST00000506896 BMP3P12645 472 aa23.34■■□□□ 1.33
SNX25-204ENST00000506896 MAPK4P31152 587 aa23.34■■□□□ 1.33
SNX25-204ENST00000506896 SLC1A4P43007 532 aa23.34■■□□□ 1.33
SNX25-204ENST00000506896 NUP88Q99567 741 aaPredicted RBP23.34■■□□□ 1.33
SNX25-204ENST00000506896 SLF1Q9BQI6 1058 aa23.34■■□□□ 1.33
SNX25-204ENST00000506896 ZKSCAN3Q9BRR0 538 aa23.34■■□□□ 1.33
SNX25-204ENST00000506896 BTBD7Q9P203 1132 aa23.34■■□□□ 1.33
SNX25-204ENST00000506896 EPB41L2O43491 1005 aaKnown RBP23.33■■□□□ 1.33
SNX25-204ENST00000506896 ELNP15502 786 aa23.33■■□□□ 1.33
SNX25-204ENST00000506896 PRPF38AQ8NAV1 312 aaKnown RBP23.33■■□□□ 1.33
SNX25-204ENST00000506896 DCAF4Q8WV16 495 aa23.33■■□□□ 1.33
SNX25-204ENST00000506896 ADAMTS5Q9UNA0 930 aa23.33■■□□□ 1.33
SNX25-204ENST00000506896 TNKSO95271 1327 aa23.33■■□□□ 1.32
SNX25-204ENST00000506896 MCCP23508 829 aa23.32■■□□□ 1.32
SNX25-204ENST00000506896 UBXN2AP68543 259 aa23.32■■□□□ 1.32
SNX25-204ENST00000506896 SART3Q15020 963 aaKnown RBP23.32■■□□□ 1.32
SNX25-204ENST00000506896 STOX1Q6ZVD7 989 aa23.32■■□□□ 1.32
SNX25-204ENST00000506896 CCAR1Q8IX12 1150 aaKnown RBP23.32■■□□□ 1.32
SNX25-204ENST00000506896 ENAHQ8N8S7 591 aaPredicted RBP23.32■■□□□ 1.32
SNX25-204ENST00000506896 USP6NLQ92738 828 aa23.32■■□□□ 1.32
SNX25-204ENST00000506896 ATG4CQ96DT6 458 aa23.32■■□□□ 1.32
SNX25-204ENST00000506896 FBXO28Q9NVF7 368 aa23.32■■□□□ 1.32
SNX25-204ENST00000506896 BIN2Q9UBW5 565 aaPredicted RBP23.32■■□□□ 1.32
SNX25-204ENST00000506896 TAF6LQ9Y6J9 622 aa23.32■■□□□ 1.32
SNX25-204ENST00000506896 A0A0G2JMZ2 1700 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 PLA2G6O60733 806 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 CCL5P13501 91 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 ZKSCAN1P17029 563 aaPredicted RBP23.31■■□□□ 1.32
SNX25-204ENST00000506896 STAT2P52630 851 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 GPR142Q7Z601 462 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 FAM160B2Q86V87 743 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 CHURC1Q8WUH1 139 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 KAT14Q9H8E8 782 aa23.31■■□□□ 1.32
SNX25-204ENST00000506896 ISY1Q9ULR0 285 aaKnown RBP23.31■■□□□ 1.32
SNX25-204ENST00000506896 ERICH2A1L162 156 aa23.3■■□□□ 1.32
SNX25-204ENST00000506896 VWA5AO00534 786 aa23.3■■□□□ 1.32
SNX25-204ENST00000506896 FDX1P10109 184 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms