RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 HOXA7P31268 230 aaPredicted RBP8.61□□□□□ -1.03
GYPB-206ENST00000506516 TFAP4Q01664 338 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 ICA1Q05084 483 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 ZYXQ15942 572 aaKnown RBP8.61□□□□□ -1.03
GYPB-206ENST00000506516 IMMTQ16891 758 aaKnown RBP8.61□□□□□ -1.03
GYPB-206ENST00000506516 SHROOM1Q2M3G4 852 aaPredicted RBP8.61□□□□□ -1.03
GYPB-206ENST00000506516 BMP2KLQ5H9B9 411 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 MFSD6Q6ZSS7 791 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 KIAA1211Q6ZU35 1233 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 ACER1Q8TDN7 264 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 SMCR8Q8TEV9 937 aaPredicted RBP8.61□□□□□ -1.03
GYPB-206ENST00000506516 ERO1AQ96HE7 468 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 RNF41Q9H4P4 317 aaPredicted RBP8.61□□□□□ -1.03
GYPB-206ENST00000506516 TOMM22Q9NS69 142 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 OTOFQ9HC10 1997 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 MYH7P12883 1935 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 ZMYM6O95789 1325 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 CDK5RAP2Q96SN8 1893 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 TSPY2A6NKD2 308 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 FOXP2O15409 715 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 RANBP6O60518 1105 aaKnown RBP8.6□□□□□ -1.03
GYPB-206ENST00000506516 CYP2C8P10632 490 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 EEF2P13639 858 aaKnown RBP8.6□□□□□ -1.03
GYPB-206ENST00000506516 GCLCP48506 637 aaPredicted RBP8.6□□□□□ -1.03
GYPB-206ENST00000506516 NT5C2P49902 561 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 IRX3P78415 501 aaPredicted RBP8.6□□□□□ -1.03
GYPB-206ENST00000506516 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
GYPB-206ENST00000506516 FAM47AQ5JRC9 791 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 VARS2Q5ST30 1063 aaKnown RBP8.6□□□□□ -1.03
GYPB-206ENST00000506516 AKNAD1Q5T1N1 836 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 TREML2Q5T2D2 321 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 C17orf99Q6UX52 265 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 NEDD1Q8NHV4 660 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 LPAR1Q92633 364 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 C12orf42Q96LP6 360 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 NYAP2Q9P242 653 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 CLIP2Q9UDT6 1046 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 CPA4Q9UI42 421 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 TMX2Q9Y320 296 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 NAV1Q8NEY1 1877 aa8.6□□□□□ -1.03
GYPB-206ENST00000506516 A0A1W2PRG0 241 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 SGSM2O43147 1006 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 ORC4O43929 436 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 RAD21O60216 631 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 TTLL1O95922 423 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 FGRP09769 529 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 HOXD10P28358 340 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 HAND2P61296 217 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 DGKZQ13574 1117 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 RRP12Q5JTH9 1297 aaKnown RBP8.59□□□□□ -1.03
GYPB-206ENST00000506516 CATSPERGQ6ZRH7 1159 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 CTU1Q7Z7A3 348 aaKnown RBP8.59□□□□□ -1.03
GYPB-206ENST00000506516 SKAP1Q86WV1 359 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 SIAH1Q8IUQ4 282 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 TNS4Q8IZW8 715 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 GTF3C2Q8WUA4 911 aaPredicted RBP8.59□□□□□ -1.03
GYPB-206ENST00000506516 MKL1Q969V6 931 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
GYPB-206ENST00000506516 ASCC2Q9H1I8 757 aaPredicted RBP8.59□□□□□ -1.03
GYPB-206ENST00000506516 VCPKMTQ9H867 229 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 INCENPQ9NQS7 918 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 MTMR4Q9NYA4 1195 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 HOXC10Q9NYD6 342 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 DOCK1Q14185 1865 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 SIPA1L1O43166 1804 aa8.59□□□□□ -1.03
GYPB-206ENST00000506516 FMNL1O95466 1100 aaPredicted RBP8.58□□□□□ -1.04
GYPB-206ENST00000506516 GNRH1P01148 92 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 VCAM1P19320 739 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 LACTBP83111 547 aaPredicted RBP8.58□□□□□ -1.04
GYPB-206ENST00000506516 PDE4DQ08499 809 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 COG2Q14746 738 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 SPNS2Q8IVW8 549 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 ANKRD13CQ8N6S4 541 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 CD99L2Q8TCZ2 262 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 ESR2Q92731 530 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 CEP95Q96GE4 821 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 P2RX7Q99572 595 aaKnown RBP8.58□□□□□ -1.04
GYPB-206ENST00000506516 RPAP3Q9H6T3 665 aaPredicted RBP8.58□□□□□ -1.04
GYPB-206ENST00000506516 SYNPO2Q9UMS6 1093 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
GYPB-206ENST00000506516 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
GYPB-206ENST00000506516 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
GYPB-206ENST00000506516 IGKV6D-41A0A0C4DH26 115 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 F5H6K3 240 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 WDR46O15213 610 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms