RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 TMEM88BA6NKF7 163 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 CPLX1O14810 134 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 DHX16O60231 1041 aaKnown RBP16.66■□□□□ 0.26
YIPF3-213ENST00000506469 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 BMP3P12645 472 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 HMGCS2P54868 508 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 KCTD1Q719H9 257 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 LPAR1Q92633 364 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 ISY1Q9ULR0 285 aaKnown RBP16.66■□□□□ 0.26
YIPF3-213ENST00000506469 TLL2Q9Y6L7 1015 aa16.66■□□□□ 0.26
YIPF3-213ENST00000506469 KLRF2D3W0D1 207 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 CXCL11O14625 94 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 DTNBO60941 627 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 HSP90AA1P07900 732 aaKnown RBP16.65■□□□□ 0.26
YIPF3-213ENST00000506469 GNAQP50148 359 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 SH3D19Q5HYK7 790 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 FAM83BQ5T0W9 1011 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 GPATCH4Q5T3I0 446 aaKnown RBP16.65■□□□□ 0.26
YIPF3-213ENST00000506469 CPLX2Q6PUV4 134 aaKnown RBP16.65■□□□□ 0.26
YIPF3-213ENST00000506469 CMTR1Q8N1G2 835 aaKnown RBP16.65■□□□□ 0.26
YIPF3-213ENST00000506469 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 C12orf42Q96LP6 360 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 IPO9Q96P70 1041 aaKnown RBP16.65■□□□□ 0.26
YIPF3-213ENST00000506469 TMOD4Q9NZQ9 345 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
YIPF3-213ENST00000506469 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
YIPF3-213ENST00000506469 WDR46O15213 610 aaKnown RBP16.64■□□□□ 0.25
YIPF3-213ENST00000506469 NTRK3Q16288 839 aa16.64■□□□□ 0.25
YIPF3-213ENST00000506469 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
YIPF3-213ENST00000506469 CCDC82Q8N4S0 544 aa16.64■□□□□ 0.25
YIPF3-213ENST00000506469 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
YIPF3-213ENST00000506469 NSUN7Q8NE18 718 aaKnown RBP16.64■□□□□ 0.25
YIPF3-213ENST00000506469 INTS4Q96HW7 963 aaKnown RBP16.64■□□□□ 0.25
YIPF3-213ENST00000506469 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
YIPF3-213ENST00000506469 LLPHQ9BRT6 129 aaKnown RBP16.64■□□□□ 0.25
YIPF3-213ENST00000506469 ABT1Q9ULW3 272 aaKnown RBP16.64■□□□□ 0.25
YIPF3-213ENST00000506469 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
YIPF3-213ENST00000506469 TRPM7Q96QT4 1865 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 A0A0G2JLL6 359 aaPredicted RBP16.63■□□□□ 0.25
YIPF3-213ENST00000506469 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 JAK2O60674 1132 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 PPFIA3O75145 1194 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 CDKL5O76039 1030 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 IFNAR1P17181 557 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 VCAM1P19320 739 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
YIPF3-213ENST00000506469 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
YIPF3-213ENST00000506469 SPRYD7Q5W111 196 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 PRRT2Q7Z6L0 340 aaPredicted RBP16.63■□□□□ 0.25
YIPF3-213ENST00000506469 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
YIPF3-213ENST00000506469 PTPDC1A2A3K4 754 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 SLC16A2P36021 539 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 FUT2Q10981 343 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 SNAPC2Q13487 334 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 RASAL3Q86YV0 1011 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 SMARCC2Q8TAQ2 1214 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 PHKBQ93100 1093 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 RPAP3Q9H6T3 665 aaPredicted RBP16.62■□□□□ 0.25
YIPF3-213ENST00000506469 MYH4Q9Y623 1939 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 CNTNAP5Q8WYK1 1306 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 ZBTB48P10074 688 aaPredicted RBP16.62■□□□□ 0.25
YIPF3-213ENST00000506469 APLP1P51693 650 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
YIPF3-213ENST00000506469 IKQ13123 557 aaPredicted RBP16.62■□□□□ 0.25
YIPF3-213ENST00000506469 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
YIPF3-213ENST00000506469 CYTH3O43739 400 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 FMNL1O95466 1100 aaPredicted RBP16.61■□□□□ 0.25
YIPF3-213ENST00000506469 SMARCA1P28370 1054 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 STAT2P52630 851 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 GTF2A2P52657 109 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 MOGSQ13724 837 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 FAM160B2Q86V87 743 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 PROCA1Q8NCQ7 364 aaPredicted RBP16.61■□□□□ 0.25
YIPF3-213ENST00000506469 HHIPL1Q96JK4 782 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 SPZ1Q9BXG8 430 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 TANGO6Q9C0B7 1094 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 FEM1BQ9UK73 627 aa16.61■□□□□ 0.25
YIPF3-213ENST00000506469 PLA2G6O60733 806 aa16.6■□□□□ 0.25
YIPF3-213ENST00000506469 SLC10A3P09131 477 aa16.6■□□□□ 0.25
YIPF3-213ENST00000506469 GJB2P29033 226 aa16.6■□□□□ 0.25
YIPF3-213ENST00000506469 HMGN5P82970 282 aaKnown RBP16.6■□□□□ 0.25
YIPF3-213ENST00000506469 TREML2Q5T2D2 321 aa16.6■□□□□ 0.25
YIPF3-213ENST00000506469 SYDE2Q5VT97 1194 aa16.6■□□□□ 0.25
YIPF3-213ENST00000506469 FASTKD5Q7L8L6 764 aaKnown RBP16.6■□□□□ 0.25
YIPF3-213ENST00000506469 TRIM22Q8IYM9 498 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms