RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 POLR3GO15318 223 aaPredicted RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 C16orf86Q6ZW13 317 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 POTECB2RU33 542 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 SEPT2Q15019 361 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 IFIT1BQ5T764 474 aaKnown RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 ZDHHC9Q9Y397 364 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 DICER1Q9UPY3 1922 aaKnown RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 GH2P01242 217 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 RPS12P25398 132 aaKnown RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 SPICE1Q8N0Z3 855 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 GLIS2Q9BZE0 524 aaPredicted RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.16□□□□□ -0.3
ITGA3-208ENST00000506437 PI4KBQ9UBF8 816 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
ITGA3-208ENST00000506437 ERICH2A1L162 156 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
ITGA3-208ENST00000506437 GABPAQ06546 454 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
ITGA3-208ENST00000506437 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 TRAF5O00463 557 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 EPHX2P34913 555 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 CERKLQ49MI3 558 aaPredicted RBP13.15□□□□□ -0.3
ITGA3-208ENST00000506437 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 MRIQ9BWK5 157 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 JRKLQ9Y4A0 524 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 ZMYM6O95789 1325 aa13.15□□□□□ -0.3
ITGA3-208ENST00000506437 AP5Z1O43299 807 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 INPP5BP32019 993 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 CTDNEP1O95476 244 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 ECE1P42892 770 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 USP48Q86UV5 1035 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
ITGA3-208ENST00000506437 GJB2P29033 226 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 SEC23AQ15436 765 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 USP17L2Q6R6M4 530 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 NBPF11Q86T75 865 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
ITGA3-208ENST00000506437 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 TEPSINQ96N21 525 aa13.14□□□□□ -0.31
ITGA3-208ENST00000506437 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
ITGA3-208ENST00000506437 PLEKHA8P1O95397 391 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 VEGFAP15692 232 aaPredicted RBP13.13□□□□□ -0.31
ITGA3-208ENST00000506437 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
ITGA3-208ENST00000506437 ELF2Q15723 593 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 VAT1LQ9HCJ6 419 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 ZBTB43O43298 467 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 LRMPQ12912 555 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 SIPA1L1O43166 1804 aa13.13□□□□□ -0.31
ITGA3-208ENST00000506437 ORC4O43929 436 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
ITGA3-208ENST00000506437 SNAP25P60880 206 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 ACER1Q8TDN7 264 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 SGSM3Q96HU1 749 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
ITGA3-208ENST00000506437 ZNF215Q9UL58 517 aaPredicted RBP13.12□□□□□ -0.31
ITGA3-208ENST00000506437 LAMB1P07942 1786 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 FOCADQ5VW36 1801 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 BMS1Q14692 1282 aaKnown RBP13.12□□□□□ -0.31
ITGA3-208ENST00000506437 FAM173BQ6P4H8 233 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 UBA5Q9GZZ9 404 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 SMC3Q9UQE7 1217 aa13.12□□□□□ -0.31
ITGA3-208ENST00000506437 ANKRD65E5RJM6 399 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 CPLX1O14810 134 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 ENTPD3O75355 529 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 FGRP09769 529 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 NUCB2P80303 420 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 CCDC112Q8NEF3 446 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 MYH8P13535 1937 aa13.11□□□□□ -0.31
ITGA3-208ENST00000506437 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
ITGA3-208ENST00000506437 EEF2P13639 858 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms