RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ZNF24P17028 368 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 IBSPP21815 317 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 GCGRP47871 477 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 AMPHP49418 695 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 PAK2Q13177 524 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 TCIRG1Q13488 830 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 ZRSR2Q15696 482 aaKnown RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 SYT10Q6XYQ8 523 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 CCDC186Q7Z3E2 898 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 CCDC91Q7Z6B0 441 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 PGBD3Q8N328 593 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 EXOC6Q8TAG9 804 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 TINF2Q9BSI4 451 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 USP26Q9BXU7 913 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 P4HA2O15460 535 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 ATMINO43313 823 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 B4GALT4O60513 344 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 MT-CO1P00395 513 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 GCP02774 474 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 HARSP12081 509 aaKnown RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 RPL17P18621 184 aaKnown RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 DNAJB2P25686 324 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 PDCD2Q16342 344 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 PTPROQ16827 1216 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 VARS2Q5ST30 1063 aaKnown RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 HOMER3Q9NSC5 361 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 MAGEC2Q9UBF1 373 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 WDR90Q96KV7 1748 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 COL1A1P02452 1464 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 A0A1W2PRU2 124 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 SH3BP5O60239 455 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 PRPHP41219 470 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 NEK3P51956 506 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 CRYMQ14894 314 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 IL31Q6EBC2 164 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 COL23A1Q86Y22 540 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 SMYD1Q8NB12 490 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 RNF34Q969K3 372 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 DPH2Q9BQC3 489 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 SLKQ9H2G2 1235 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 LRFN2Q9ULH4 789 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 EME2A4GXA9 379 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 CBFA2T2O43439 604 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 NBNO60934 754 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 VAMP4O75379 141 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 TPPPO94811 219 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 BDNFP23560 247 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 SLC4A3P48751 1232 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 FANCCQ00597 558 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 FOXD4Q12950 439 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 STRN3Q13033 797 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 TRIM14Q14142 442 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 TDRD10Q5VZ19 366 aaKnown RBP2.63□□□□□ -1.99
NEDD4-205ENST00000506154 MPRIPQ6WCQ1 1025 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 CERKQ8TCT0 537 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 KCNF1Q9H3M0 494 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 CHST12Q9NRB3 414 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 CCDC39Q9UFE4 941 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 PDZRN3Q9UPQ7 1066 aa2.63□□□□□ -1.99
NEDD4-205ENST00000506154 SBF1O95248 1867 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SORBS3O60504 671 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 ATF3P18847 181 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 PTPREP23469 700 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 COPB2P35606 906 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CDK8P49336 464 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 ZBED6P86452 979 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 PLCB3Q01970 1234 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 DDX10Q13206 875 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 GRIN2CQ14957 1233 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SEZ6Q53EL9 994 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 ARSJQ5FYB0 599 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 OTUD6AQ7L8S5 288 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SLF2Q8IX21 1173 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SIRT2Q8IXJ6 389 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 KRT222Q8N1A0 295 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TDRD7Q8NHU6 1098 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 SRRTQ9BXP5 876 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CHCHD3Q9NX63 227 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TTLL3Q9Y4R7 772 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TMCO5BA8MYB1 307 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 NDUFB5O43674 189 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 ATG7O95352 703 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 EIF1AXP47813 144 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 RFX5P48382 616 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 RABL6Q3YEC7 729 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 BNC2Q6ZN30 1099 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 LRRC69Q6ZNQ3 347 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 EIF2AK1Q9BQI3 630 aaKnown RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 GINM1Q9NU53 330 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 CXXC1Q9P0U4 656 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TMEM63CQ9P1W3 806 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 FRMPD3Q5JV73 1810 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 A0A1B0GUL7 405 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 GOLGA8CPA6NN73 597 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 PPP1R12BO60237 982 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-205ENST00000506154 TMEM127O75204 238 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 ASMTLO95671 621 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 FESP07332 822 aa2.62□□□□□ -1.99
NEDD4-205ENST00000506154 IDO1P14902 403 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms