RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 J3QL48 77 aa8.78□□□□□ -1
VCAN-206ENST00000505615 DNM1LO00429 736 aa8.78□□□□□ -1
VCAN-206ENST00000505615 IGHA2P01877 340 aa8.78□□□□□ -1
VCAN-206ENST00000505615 SNRPBP14678 240 aaKnown RBP8.78□□□□□ -1
VCAN-206ENST00000505615 ITGB8P26012 769 aa8.78□□□□□ -1
VCAN-206ENST00000505615 RGS2P41220 211 aa8.78□□□□□ -1
VCAN-206ENST00000505615 PABPC4Q13310 644 aaKnown RBP eCLIP8.78□□□□□ -1
VCAN-206ENST00000505615 RRP1BQ14684 758 aaKnown RBP8.78□□□□□ -1
VCAN-206ENST00000505615 Q3C1V9 767 aa8.78□□□□□ -1
VCAN-206ENST00000505615 TRIM60Q495X7 471 aa8.78□□□□□ -1
VCAN-206ENST00000505615 AKNAD1Q5T1N1 836 aa8.78□□□□□ -1
VCAN-206ENST00000505615 GPR142Q7Z601 462 aa8.78□□□□□ -1
VCAN-206ENST00000505615 ZNF280CQ8ND82 737 aa8.78□□□□□ -1
VCAN-206ENST00000505615 LPAR1Q92633 364 aa8.78□□□□□ -1
VCAN-206ENST00000505615 TRIM43Q96BQ3 446 aaPredicted RBP8.78□□□□□ -1
VCAN-206ENST00000505615 NECAB3Q96P71 396 aaPredicted RBP8.78□□□□□ -1
VCAN-206ENST00000505615 P2RX7Q99572 595 aaKnown RBP8.78□□□□□ -1
VCAN-206ENST00000505615 DDX20Q9UHI6 824 aaKnown RBP8.78□□□□□ -1
VCAN-206ENST00000505615 ZNF236Q9UL36 1845 aa8.77□□□□□ -1
VCAN-206ENST00000505615 MAPK4P31152 587 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 HOXA7P31268 230 aaPredicted RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 HERVK_113P62684 666 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 ERVK-24P63145 666 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 MRPS5P82675 430 aaKnown RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 PDE3AQ14432 1141 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 RABL6Q3YEC7 729 aaPredicted RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 SLC39A5Q6ZMH5 540 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 ANKRD44Q8N8A2 993 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 TRPV1Q8NER1 839 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 GPRC5AQ8NFJ5 357 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 RNPC3Q96LT9 517 aaKnown RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 C1QTNF1Q9BXJ1 281 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 OSBPL5Q9H0X9 879 aaPredicted RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 ZNF576Q9H609 170 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 PRDM5Q9NQX1 630 aaPredicted RBP8.77□□□□□ -1.01
VCAN-206ENST00000505615 RBPJLQ9UBG7 517 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 ZDBF2Q9HCK1 2354 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 UTYO14607 1347 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 SALL1Q9NSC2 1324 aa8.77□□□□□ -1.01
VCAN-206ENST00000505615 TERTO14746 1132 aaKnown RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 IFIT1P09914 478 aaKnown RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 IRX3P78415 501 aaPredicted RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 INSM1Q01101 510 aaPredicted RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
VCAN-206ENST00000505615 ADGRE1Q14246 886 aa8.76□□□□□ -1.01
VCAN-206ENST00000505615 PUM3Q15397 648 aaKnown RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 GJC2Q5T442 439 aaPredicted RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 PLEKHH3Q7Z736 793 aa8.76□□□□□ -1.01
VCAN-206ENST00000505615 KLHDC4Q8TBB5 520 aa8.76□□□□□ -1.01
VCAN-206ENST00000505615 LRFN3Q9BTN0 628 aa8.76□□□□□ -1.01
VCAN-206ENST00000505615 TBC1D2Q9BYX2 928 aa8.76□□□□□ -1.01
VCAN-206ENST00000505615 SENP2Q9HC62 589 aa8.76□□□□□ -1.01
VCAN-206ENST00000505615 ZNFX1Q9P2E3 1918 aaKnown RBP8.76□□□□□ -1.01
VCAN-206ENST00000505615 FOCADQ5VW36 1801 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 MSCO60682 206 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 ALDH1L1O75891 902 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 CYBAP13498 195 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 CAP2P40123 477 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 RHBDL3P58872 404 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 SKOR1P84550 965 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 PPM1EQ8WY54 764 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 HPS1Q92902 700 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 TIFAQ96CG3 184 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 USB1Q9BQ65 265 aaKnown RBP8.75□□□□□ -1.01
VCAN-206ENST00000505615 PRDM12Q9H4Q4 367 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 BICC1Q9H694 974 aaKnown RBP8.75□□□□□ -1.01
VCAN-206ENST00000505615 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
VCAN-206ENST00000505615 HCN4Q9Y3Q4 1203 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 ZNF318Q5VUA4 2279 aa8.75□□□□□ -1.01
VCAN-206ENST00000505615 LRRC37A2A6NM11 1700 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.74□□□□□ -1.01
VCAN-206ENST00000505615 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.74□□□□□ -1.01
VCAN-206ENST00000505615 USP17L5A8MUK1 530 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 CNMDO75829 334 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 HOXC6P09630 235 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 NBPF7P0C2Y1 421 aaPredicted RBP8.74□□□□□ -1.01
VCAN-206ENST00000505615 BMP1P13497 986 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 ZEB1P37275 1124 aaPredicted RBP8.74□□□□□ -1.01
VCAN-206ENST00000505615 BACE1P56817 501 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 PICALMQ13492 652 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 MTMR2Q13614 643 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 C1orf53Q5VUE5 145 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 MFSD14CQ5VZR4 134 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 NPLOC4Q8TAT6 608 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 LPIN2Q92539 896 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 SNX27Q96L92 541 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 GAS2L1Q99501 681 aaPredicted RBP8.74□□□□□ -1.01
VCAN-206ENST00000505615 WDR18Q9BV38 432 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 EPHX3Q9H6B9 360 aa8.74□□□□□ -1.01
VCAN-206ENST00000505615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.74□□□□□ -1.01
VCAN-206ENST00000505615 WDFY4Q6ZS81 3184 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 KIAA0355O15063 1070 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 VAMP4O75379 141 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 SLC5A1P13866 664 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 CNGA1P29973 690 aa8.73□□□□□ -1.01
VCAN-206ENST00000505615 CYP2C19P33261 490 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms