RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MLECQ14165 292 aa5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 TCEA2Q15560 299 aa5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 CIAPIN1Q6FI81 312 aa5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 FAM181AQ8N9Y4 354 aa5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 FBXO15Q8NCQ5 510 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 TNKS2Q9H2K2 1166 aa5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 GSX1Q9H4S2 264 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 LGR6Q9HBX8 967 aa5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 PCDHB14Q9Y5E9 798 aa5.4□□□□□ -1.55
TRAPPC13-208ENST00000505553 KDM2BQ8NHM5 1336 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 SYNGAP1Q96PV0 1343 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 NPIPB6E9PJ23 425 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 DYNC1LI2O43237 492 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 GJB6O95452 261 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 TMEM253P0C7T8 217 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 FAM87AP0C7U9 286 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 RASIP1Q5U651 963 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 PRR23BQ6ZRT6 265 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 JMYQ8N9B5 988 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 TM9SF2Q99805 663 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 WDR18Q9BV38 432 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 KLHL42Q9P2K6 505 aa5.39□□□□□ -1.55
TRAPPC13-208ENST00000505553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 CEACAM5P06731 702 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 LIG1P18858 919 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 HOXA5P20719 270 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 MASP1P48740 699 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 SSRP1Q08945 709 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 ZNF252P-AS1Q0IIN9 211 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 SQSTM1Q13501 440 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 GAL3ST3Q96A11 431 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 ATXN3LQ9H3M9 355 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 PIDD1Q9HB75 910 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 DDX56Q9NY93 547 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 PPP1R9AQ9ULJ8 1098 aa5.38□□□□□ -1.55
TRAPPC13-208ENST00000505553 ARID4BQ4LE39 1312 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 A0A1W2PQH9 124 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 KRT1P04264 644 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 GUCY2CP25092 1073 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 AMPD3Q01432 767 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 KCNA10Q16322 511 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 EEPD1Q7L9B9 569 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 FAM178BQ8IXR5 827 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 ZSWIM2Q8NEG5 633 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 GRIN3AQ8TCU5 1115 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 ZC3H12CQ9C0D7 883 aaKnown RBP5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 CTNND2Q9UQB3 1225 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 PLAAQ9Y263 795 aa5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 POLR3KQ9Y2Y1 108 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC13-208ENST00000505553 MEIS3P2A8K0S8 358 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 GRIN3BO60391 1043 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 S100BP04271 92 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 GSTP1P09211 210 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 ID3Q02535 119 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 NCAPHQ15003 741 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 LONRF2Q1L5Z9 754 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 PLEKHG6Q3KR16 790 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 HSP90AB2PQ58FF8 381 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 TMEM67Q5HYA8 995 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 ZC3H12BQ5HYM0 836 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 C6orf15Q6UXA7 325 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 TTC6Q86TZ1 520 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 RPUSD2Q8IZ73 545 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 TAB3Q8N5C8 712 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 STK35Q8TDR2 534 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 IRF2BPLQ9H1B7 796 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 CCDC86Q9H6F5 360 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 PFDN2Q9UHV9 154 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 ZMYM5Q9UJ78 669 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 SNX11Q9Y5W9 270 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 PTCH2Q9Y6C5 1203 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 SNCAIPQ9Y6H5 919 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 PRR36Q9H6K5 1346 aa5.36□□□□□ -1.55
TRAPPC13-208ENST00000505553 CCDC163A0A0D9SF12 145 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 IQCA1LA6NCM1 817 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 TCAF2A6NFQ2 919 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 TMPRSS2O15393 492 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 RNGTTO60942 597 aaKnown RBP5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 ASMTLO95671 621 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 VIL1P09327 827 aaKnown RBP5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 MAP1SQ66K74 1059 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 INTS3Q68E01 1043 aaKnown RBP5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 RUFY4Q6ZNE9 571 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 KRT26Q7Z3Y9 468 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 PDZD3Q86UT5 571 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 ASB11Q8WXH4 323 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 KIRREL1Q96J84 757 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 FANCD2OSQ96PS1 177 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 SLC26A8Q96RN1 970 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 EPN3Q9H201 632 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 KRT82Q9NSB4 513 aa5.35□□□□□ -1.55
TRAPPC13-208ENST00000505553 DIAPH1O60610 1272 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 HTR3BO95264 441 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 PARNO95453 639 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 ZP2Q05996 745 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 PTPN11Q06124 597 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 CDK5R2Q13319 367 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 TKFCQ3LXA3 575 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 SPATC1Q76KD6 591 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms