RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PSPNO60542 156 aa8.18□□□□□ -1.1
DEPDC1B-203ENST00000505017 SEZ6Q53EL9 994 aa8.18□□□□□ -1.1
DEPDC1B-203ENST00000505017 PPP1R16BQ96T49 567 aa8.18□□□□□ -1.1
DEPDC1B-203ENST00000505017 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
DEPDC1B-203ENST00000505017 RAG1P15918 1043 aa8.17□□□□□ -1.1
DEPDC1B-203ENST00000505017 TMEM192Q8IY95 271 aa8.17□□□□□ -1.1
DEPDC1B-203ENST00000505017 LRRC56Q8IYG6 542 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1B-203ENST00000505017 SYTL5Q8TDW5 730 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1B-203ENST00000505017 EAF1Q96JC9 268 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1B-203ENST00000505017 YBX2Q9Y2T7 364 aaKnown RBP8.17□□□□□ -1.1
DEPDC1B-203ENST00000505017 MYOCOSA0A1B0GUC4 107 aa8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 FITM1A5D6W6 292 aa8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 GK5Q6ZS86 529 aa8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 HS2ST1Q7LGA3 356 aa8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 LILRA2Q8N149 483 aa8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 REXO1Q8N1G1 1221 aaKnown RBP8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 TCTN2Q96GX1 697 aa8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 ZNF512BQ96KM6 892 aaPredicted RBP8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 PEG3Q9GZU2 1588 aa8.16□□□□□ -1.1
DEPDC1B-203ENST00000505017 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 BBS9Q3SYG4 887 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 ZPBP2Q6X784 338 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 ATG14Q6ZNE5 492 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 NLRC3Q7RTR2 1065 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 ANKLE2Q86XL3 938 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 SLITRK4Q8IW52 837 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 OXR1Q8N573 874 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 DAGLBQ8NCG7 672 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 ENOX1Q8TC92 643 aaKnown RBP8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 MCOLN1Q9GZU1 580 aa8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.15□□□□□ -1.1
DEPDC1B-203ENST00000505017 NPIPB6E9PJ23 425 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 PRAMEF1O95521 474 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 GLDCP23378 1020 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 KRTAP19-4Q3LI73 84 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 INTS4Q96HW7 963 aaKnown RBP8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 TOX2Q96NM4 488 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 PRDM14Q9GZV8 571 aa8.14□□□□□ -1.11
DEPDC1B-203ENST00000505017 MEIS3P2A8K0S8 358 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 NFIBO00712 420 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 ACRP10323 421 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 NME1P15531 152 aaKnown RBP8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 ZNF326Q5BKZ1 582 aaKnown RBP8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 RNF111Q6ZNA4 994 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 NLRX1Q86UT6 975 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 IRF2BP1Q8IU81 584 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 SLC9A7Q96T83 725 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 NT5C1AQ9BXI3 368 aa8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 SMG5Q9UPR3 1016 aaKnown RBP8.13□□□□□ -1.11
DEPDC1B-203ENST00000505017 WIZO95785 1651 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 USP2O75604 605 aaPredicted RBP8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 RPL10P27635 214 aaKnown RBP8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 RNF4P78317 190 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 MLECQ14165 292 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 KCNA10Q16322 511 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 ZNF655Q8N720 491 aaPredicted RBP8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 ANKS4BQ8N8V4 417 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 HHIPL1Q96JK4 782 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 KRTAP4-9Q9BYQ8 210 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 GCM1Q9NP62 436 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 TCFL5Q9UL49 500 aa8.12□□□□□ -1.11
DEPDC1B-203ENST00000505017 SMARCA2P51531 1590 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 TNFRSF10CO14798 259 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 TMEM253P0C7T8 217 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 ZSCAN22P10073 491 aaPredicted RBP8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 ITGAEP38570 1179 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 CTSKP43235 329 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 CHRNEQ04844 493 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 WAPLQ7Z5K2 1190 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 ZNF605Q86T29 641 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 LINC00116Q8NCU8 138 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 KCNN1Q92952 543 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 MAP6Q96JE9 813 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 SLC26A8Q96RN1 970 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 ZNF552Q9H707 407 aaPredicted RBP8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 GPR160Q9UJ42 338 aa8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 TOP2AP11388 1531 aaKnown RBP8.11□□□□□ -1.11
DEPDC1B-203ENST00000505017 SIGLEC6O43699 453 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 MCM4P33991 863 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 DUSP4Q13115 394 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 KIR3DS1Q14943 382 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 AMIGO3Q86WK7 504 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 SPPL2CQ8IUH8 684 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 SIRT2Q8IXJ6 389 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 SLC6A18Q96N87 628 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 PLCD4Q9BRC7 762 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 SLC6A17Q9H1V8 727 aa8.1□□□□□ -1.11
DEPDC1B-203ENST00000505017 SHOXO15266 292 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 FKTNO75072 461 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 CLEC3AO75596 197 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 SYPP08247 313 aa8.09□□□□□ -1.11
DEPDC1B-203ENST00000505017 CCNFP41002 786 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms