RNA–Protein interactions for RNA: ENST00000504971.1

FBXO38-208, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-208	ENST00000504971	VASH1	Q7L8A9	365 aa	Predicted RBP	7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	FERMT3	Q86UX7	667 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	SIRT2	Q8IXJ6	389 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	CCDC116	Q8IYX3	515 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	PI4KAP1	Q8N8J0	262 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	PIGB	Q92521	554 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	N4BP2L2	Q92802	583 aa	Predicted RBP	7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	ZBTB10	Q96DT7	871 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	BACH2	Q9BYV9	841 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	DCTPP1	Q9H773	170 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	RMI1	Q9H9A7	625 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	CAPN10	Q9HC96	672 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	GDPD2	Q9HCC8	539 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	ATG3	Q9NT62	314 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	HOXC10	Q9NYD6	342 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	PCSK1N	Q9UHG2	260 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	ZHX1	Q9UKY1	873 aa	Predicted RBP	7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	RABL2B	Q9UNT1	228 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	USP16	Q9Y5T5	823 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	MRPL42	Q9Y6G3	142 aa	Known RBP	7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	DDX49	Q9Y6V7	483 aa	Known RBP	7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	UTY	O14607	1347 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	PRAMEF22	A3QJZ6	481 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	TTLL8	A6PVC2	850 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971		H0YHG0	523 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	CPLX1	O14810	134 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	FIBP	O43427	364 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	GNAI2	P04899	355 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	ZNF76	P36508	570 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	PTS	Q03393	145 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	CHAF1A	Q13111	956 aa	Predicted RBP	7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	BIRC3	Q13489	604 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	PROSER3	Q2NL68	480 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	TTC31	Q49AM3	519 aa	Predicted RBP	7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	PARP10	Q53GL7	1025 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	CT47A1	Q5JQC4	288 aa	Predicted RBP	7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	CEP85	Q6P2H3	762 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	SLC4A10	Q6U841	1118 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971		Q6ZVU0	165 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	WDR75	Q8IWA0	830 aa	Known RBP	7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	CCDC144CP	Q8IYA2	1237 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	LINS1	Q8NG48	757 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	TDRD7	Q8NHU6	1098 aa	Known RBP	7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	HELQ	Q8TDG4	1101 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	KIF2C	Q99661	725 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	MEIS3	Q99687	375 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	USP44	Q9H0E7	712 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	CD248	Q9HCU0	757 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	DCAF16	Q9NXF7	216 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	MKRN1	Q9UHC7	482 aa	Known RBP	7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	USP21	Q9UK80	565 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	SLC45A1	Q9Y2W3	748 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	DOT1L	Q8TEK3	1739 aa		7.77	□□□□□ -1.17
FBXO38-208	ENST00000504971	COL15A1	P39059	1388 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	POM121C	A8CG34	1229 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	SLC26A4	O43511	780 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	TSPAN7	P41732	249 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	ABL2	P42684	1182 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	ATP8B2	P98198	1209 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	NUCB1	Q02818	461 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	RAD51AP2	Q09MP3	1159 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	MTX1	Q13505	466 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	PDE1C	Q14123	709 aa	Predicted RBP	7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	SMC1A	Q14683	1233 aa	Known RBP	7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	KIF22	Q14807	665 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	SLMAP	Q14BN4	828 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	SYCP2L	Q5T4T6	812 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	ANKRD45	Q5TZF3	282 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	C9orf131	Q5VYM1	1079 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	FBXO33	Q7Z6M2	555 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	SKAP1	Q86WV1	359 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	MYOCD	Q8IZQ8	938 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	MARCH10	Q8NA82	808 aa	Predicted RBP	7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	MYRIP	Q8NFW9	859 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	PLBD2	Q8NHP8	589 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	GML	Q99445	158 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	METTL22	Q9BUU2	404 aa	Predicted RBP	7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	PPP1R12C	Q9BZL4	782 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	TGIF2	Q9GZN2	237 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	DIAPH3	Q9NSV4	1193 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	BIN2	Q9UBW5	565 aa	Predicted RBP	7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	MAP3K2	Q9Y2U5	619 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	ATRN	O75882	1429 aa		7.76	□□□□□ -1.17
FBXO38-208	ENST00000504971	SPINT1	O43278	529 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	STARD3NL	O95772	234 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	BPNT1	O95861	308 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	UBTFL1	P0CB47	393 aa	Predicted RBP	7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	CDC27	P30260	824 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	SIM2	Q14190	667 aa	Predicted RBP	7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	ERFE	Q4G0M1	354 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	INO80D	Q53TQ3	878 aa	Predicted RBP	7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	COPS6	Q7L5N1	327 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	SUGP1	Q8IWZ8	645 aa	Known RBP	7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	IFNL3	Q8IZI9	196 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	NBPF15	Q8N660	670 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	TBC1D31	Q96DN5	1066 aa		7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	ZNF594	Q96JF6	807 aa	Predicted RBP	7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	GJD4	Q96KN9	370 aa	Predicted RBP	7.75	□□□□□ -1.17
FBXO38-208	ENST00000504971	XPO4	Q9C0E2	1151 aa	Known RBP	7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms