RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 USP17L13C9JLJ4 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 USP17L11C9JVI0 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 USP17L18D6R9N7 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 USP17L22D6RA61 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 USP17L17D6RBQ6 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 USP17L19D6RCP7 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 USP17L20D6RJB6 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 BMP3P12645 472 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 IRX3P78415 501 aaPredicted RBP18.54■□□□□ 0.56
AFF1-205ENST00000504956 USP17L24Q0WX57 530 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 PABPC4Q13310 644 aaKnown RBP eCLIP18.54■□□□□ 0.56
AFF1-205ENST00000504956 TAF1CQ15572 869 aaPredicted RBP18.54■□□□□ 0.56
AFF1-205ENST00000504956 CATSPERGQ6ZRH7 1159 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 ZNF654Q8IZM8 581 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 DCAF4Q8WV16 495 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 BRF1Q92994 677 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 GMCL1Q96IK5 515 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 ASCC2Q9H1I8 757 aaPredicted RBP18.54■□□□□ 0.56
AFF1-205ENST00000504956 PDRG1Q9NUG6 133 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 FBXO28Q9NVF7 368 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 HOXA7P31268 230 aaPredicted RBP18.54■□□□□ 0.56
AFF1-205ENST00000504956 MAP2K1Q02750 393 aaPredicted RBP18.54■□□□□ 0.56
AFF1-205ENST00000504956 APOBRQ0VD83 1088 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 CATIPQ7Z7H3 387 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 SLC45A1Q9Y2W3 748 aa18.54■□□□□ 0.56
AFF1-205ENST00000504956 TRPA1O75762 1119 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 FLOT1O75955 427 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 GOLGA8HP0CJ92 632 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 SNHG28P0DPA3 235 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 RXRAP19793 462 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 OSBPP22059 807 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 TOB2Q14106 344 aaPredicted RBP18.53■□□□□ 0.56
AFF1-205ENST00000504956 SGMS1Q86VZ5 419 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 TMTC2Q8N394 836 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 NUP133Q8WUM0 1156 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 ZCCHC17Q9NP64 241 aaKnown RBP18.53■□□□□ 0.56
AFF1-205ENST00000504956 GPCPD1Q9NPB8 672 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 RNF186Q9NXI6 227 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 BRPF3Q9ULD4 1205 aa18.53■□□□□ 0.56
AFF1-205ENST00000504956 KLF18A0A0U1RQI7 1052 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 TMEM232C9JQI7 657 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 ALDH1A1P00352 501 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 NEK4P51957 841 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 CRHR2Q13324 411 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 MICU3Q86XE3 530 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 PARK7Q99497 189 aaKnown RBP18.52■□□□□ 0.56
AFF1-205ENST00000504956 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
AFF1-205ENST00000504956 AGXT2Q9BYV1 514 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 NAP1L2Q9ULW6 460 aaPredicted RBP18.52■□□□□ 0.56
AFF1-205ENST00000504956 SLC12A7Q9Y666 1083 aa18.52■□□□□ 0.56
AFF1-205ENST00000504956 SMCHD1A6NHR9 2005 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 ZNF543Q08ER8 600 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 TROAPQ12815 778 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 IKQ13123 557 aaPredicted RBP18.51■□□□□ 0.55
AFF1-205ENST00000504956 TTBK2Q6IQ55 1244 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 APOA5Q6Q788 366 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 CCDC144CPQ8IYA2 1237 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 JMYQ8N9B5 988 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 SMCR8Q8TEV9 937 aaPredicted RBP18.51■□□□□ 0.55
AFF1-205ENST00000504956 P2RX7Q99572 595 aaKnown RBP18.51■□□□□ 0.55
AFF1-205ENST00000504956 ZSWIM8A7E2V4 1837 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 MGAMO43451 1857 aa18.51■□□□□ 0.55
AFF1-205ENST00000504956 DDAH1O94760 285 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 PARP1P09874 1014 aaKnown RBP18.5■□□□□ 0.55
AFF1-205ENST00000504956 STAT2P52630 851 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
AFF1-205ENST00000504956 STAG2Q8N3U4 1231 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 FBXL16Q8N461 479 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 BEGAINQ9BUH8 593 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 R3HDMLQ9H3Y0 253 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 TSKSQ9UJT2 592 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 SPDYE16A6NNV3 312 aaPredicted RBP18.5■□□□□ 0.55
AFF1-205ENST00000504956 CA12O43570 354 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 SLC16A2P36021 539 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 AK2P54819 239 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 HERVK_113P62684 666 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 GRM4Q14833 912 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 KIFC2Q96AC6 838 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 ATG4CQ96DT6 458 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 SLF1Q9BQI6 1058 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 ZFYVE28Q9HCC9 887 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 WBP1LQ9NX94 342 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 MAD2L2Q9UI95 211 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 FEM1BQ9UK73 627 aa18.5■□□□□ 0.55
AFF1-205ENST00000504956 GOLGA8BA8MQT2 603 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 PEX10O60683 326 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 DSG3P32926 999 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 COG2Q14746 738 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 GPATCH4Q5T3I0 446 aaKnown RBP18.49■□□□□ 0.55
AFF1-205ENST00000504956 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 PPP1R9AQ9ULJ8 1098 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 ADGRA2Q96PE1 1338 aa18.49■□□□□ 0.55
AFF1-205ENST00000504956 ZBTB43O43298 467 aa18.48■□□□□ 0.55
AFF1-205ENST00000504956 RABEP1Q15276 862 aa18.48■□□□□ 0.55
AFF1-205ENST00000504956 CTCFLQ8NI51 663 aaPredicted RBP18.48■□□□□ 0.55
AFF1-205ENST00000504956 PAGR1Q9BTK6 254 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms