RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 PSMC4P43686 418 aa23.79■■□□□ 1.4
HERC6-205ENST00000504905 TRDNQ13061 729 aa23.79■■□□□ 1.4
HERC6-205ENST00000504905 FAM83BQ5T0W9 1011 aa23.79■■□□□ 1.4
HERC6-205ENST00000504905 IQCA1Q86XH1 822 aa23.79■■□□□ 1.4
HERC6-205ENST00000504905 NKX2-3Q8TAU0 364 aa23.79■■□□□ 1.4
HERC6-205ENST00000504905 HOXC10Q9NYD6 342 aa23.79■■□□□ 1.4
HERC6-205ENST00000504905 MORF4L1Q9UBU8 362 aa23.79■■□□□ 1.4
HERC6-205ENST00000504905 SPDYE16A6NNV3 312 aaPredicted RBP23.78■■□□□ 1.4
HERC6-205ENST00000504905 FMNL1O95466 1100 aaPredicted RBP23.78■■□□□ 1.4
HERC6-205ENST00000504905 NOVP48745 357 aa23.78■■□□□ 1.4
HERC6-205ENST00000504905 SLFN13Q68D06 897 aa23.78■■□□□ 1.4
HERC6-205ENST00000504905 SAMD1Q6SPF0 538 aaPredicted RBP23.78■■□□□ 1.4
HERC6-205ENST00000504905 LBX2Q6XYB7 198 aa23.78■■□□□ 1.4
HERC6-205ENST00000504905 GPRC5AQ8NFJ5 357 aa23.78■■□□□ 1.4
HERC6-205ENST00000504905 NUP88Q99567 741 aaPredicted RBP23.78■■□□□ 1.4
HERC6-205ENST00000504905 TXNRD2Q9NNW7 524 aa23.78■■□□□ 1.4
HERC6-205ENST00000504905 RBPJLQ9UBG7 517 aa23.78■■□□□ 1.4
HERC6-205ENST00000504905 MYCP01106 439 aaPredicted RBP23.77■■□□□ 1.4
HERC6-205ENST00000504905 TOP1P11387 765 aaKnown RBP23.77■■□□□ 1.4
HERC6-205ENST00000504905 FCGRTP55899 365 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 CCDC178Q5BJE1 867 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 TRIM47Q96LD4 638 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 TTC14Q96N46 770 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 ZKSCAN3Q9BRR0 538 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 ZSWIM5Q9P217 1185 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 RABGAP1Q9Y3P9 1069 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 MYPNQ86TC9 1320 aa23.77■■□□□ 1.4
HERC6-205ENST00000504905 E7EWF7 191 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 H0YGN5 161 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 PEX10O60683 326 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 CTGFP29279 349 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 DSG3P32926 999 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 ERVK-9P63128 1117 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 ERVK-24P63145 666 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 RALYLQ86SE5 291 aaKnown RBP23.76■■□□□ 1.39
HERC6-205ENST00000504905 TMEM47Q9BQJ4 181 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 ISY1Q9ULR0 285 aaKnown RBP23.76■■□□□ 1.39
HERC6-205ENST00000504905 TAF6LQ9Y6J9 622 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 A0A0G2JMZ2 1700 aa23.76■■□□□ 1.39
HERC6-205ENST00000504905 SLC27A2O14975 620 aa23.75■■□□□ 1.39
HERC6-205ENST00000504905 CREB3L3Q68CJ9 461 aa23.75■■□□□ 1.39
HERC6-205ENST00000504905 POTEEQ6S8J3 1075 aa23.75■■□□□ 1.39
HERC6-205ENST00000504905 NCOA7Q8NI08 942 aa23.75■■□□□ 1.39
HERC6-205ENST00000504905 ZSCAN10Q96SZ4 725 aaPredicted RBP23.75■■□□□ 1.39
HERC6-205ENST00000504905 UBAC1Q9BSL1 405 aa23.75■■□□□ 1.39
HERC6-205ENST00000504905 FBXO28Q9NVF7 368 aa23.75■■□□□ 1.39
HERC6-205ENST00000504905 MTMR7Q9Y216 660 aa23.75■■□□□ 1.39
HERC6-205ENST00000504905 TNPO2O14787 897 aaKnown RBP23.74■■□□□ 1.39
HERC6-205ENST00000504905 BMP3P12645 472 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 HOXD10P28358 340 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 SLC1A4P43007 532 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 NECTIN1Q15223 517 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 RNF20Q5VTR2 975 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 RCSD1Q6JBY9 416 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 DGKHQ86XP1 1220 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 MB21D1Q8N884 522 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 ATG4CQ96DT6 458 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 GMCL1Q96IK5 515 aa23.74■■□□□ 1.39
HERC6-205ENST00000504905 COL11A1P12107 1806 aaPredicted RBP23.74■■□□□ 1.39
HERC6-205ENST00000504905 CNMDO75829 334 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 MCCP23508 829 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 CCNA1P78396 465 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 Q3C1V9 767 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 STOX1Q6ZVD7 989 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 CCAR1Q8IX12 1150 aaKnown RBP23.73■■□□□ 1.39
HERC6-205ENST00000504905 CHMP4CQ96CF2 233 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 SLF1Q9BQI6 1058 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 BTBD7Q9P203 1132 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 SRRDQ9UH36 339 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 FEM1BQ9UK73 627 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 PPP1R9AQ9ULJ8 1098 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 TNKSO95271 1327 aa23.73■■□□□ 1.39
HERC6-205ENST00000504905 REC8O95072 547 aa23.72■■□□□ 1.39
HERC6-205ENST00000504905 CYB5R4Q7L1T6 521 aa23.72■■□□□ 1.39
HERC6-205ENST00000504905 DCAF4Q8WV16 495 aa23.72■■□□□ 1.39
HERC6-205ENST00000504905 COA7Q96BR5 231 aa23.72■■□□□ 1.39
HERC6-205ENST00000504905 DOCK3Q8IZD9 2030 aa23.72■■□□□ 1.39
HERC6-205ENST00000504905 CEP290O15078 2479 aa23.71■■□□□ 1.39
HERC6-205ENST00000504905 ENAHQ8N8S7 591 aaPredicted RBP23.71■■□□□ 1.39
HERC6-205ENST00000504905 PRPF38AQ8NAV1 312 aaKnown RBP23.71■■□□□ 1.39
HERC6-205ENST00000504905 SHISA4Q96DD7 197 aa23.71■■□□□ 1.39
HERC6-205ENST00000504905 TMEM232C9JQI7 657 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 MAPK4P31152 587 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 STAT2P52630 851 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 IKQ13123 557 aaPredicted RBP23.7■■□□□ 1.38
HERC6-205ENST00000504905 PLS1Q14651 629 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 MTFR1Q15390 333 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 CCDC96Q2M329 555 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 KCTD1Q719H9 257 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 ANKS1AQ92625 1134 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 KIFC2Q96AC6 838 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 KAT14Q9H8E8 782 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 CWC22Q9HCG8 908 aaKnown RBP23.7■■□□□ 1.38
HERC6-205ENST00000504905 ADAMTS5Q9UNA0 930 aa23.7■■□□□ 1.38
HERC6-205ENST00000504905 VWA5AO00534 786 aa23.69■■□□□ 1.38
HERC6-205ENST00000504905 SART3Q15020 963 aaKnown RBP23.69■■□□□ 1.38
HERC6-205ENST00000504905 IFIT1BQ5T764 474 aaKnown RBP23.69■■□□□ 1.38
HERC6-205ENST00000504905 RASGRP2Q7LDG7 609 aa23.69■■□□□ 1.38
HERC6-205ENST00000504905 FAM160B2Q86V87 743 aa23.69■■□□□ 1.38
HERC6-205ENST00000504905 CHURC1Q8WUH1 139 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms