RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 ZNF444Q8N0Y2 327 aaPredicted RBP14.81□□□□□ -0.04
PDGFRA-204ENST00000504461 NACAP1Q9BZK3 213 aa14.81□□□□□ -0.04
PDGFRA-204ENST00000504461 C11orf49Q9H6J7 331 aa14.81□□□□□ -0.04
PDGFRA-204ENST00000504461 OGDHLQ9ULD0 1010 aa14.81□□□□□ -0.04
PDGFRA-204ENST00000504461 M0R2C6 588 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 ERCC3P19447 782 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 CNGA1P29973 690 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 PDE1AP54750 535 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 NCAPG2Q86XI2 1143 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 IFNL3Q8IZI9 196 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 SHCBP1Q8NEM2 672 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 NPLOC4Q8TAT6 608 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 PI4K2BQ8TCG2 481 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 OTUD7AQ8TE49 926 aaPredicted RBP14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 ATG4CQ96DT6 458 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 MROH8Q9H579 483 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 SLC5A4Q9NY91 659 aa14.8□□□□□ -0.04
PDGFRA-204ENST00000504461 HOXC6P09630 235 aa14.79□□□□□ -0.04
PDGFRA-204ENST00000504461 RASA1P20936 1047 aa14.79□□□□□ -0.04
PDGFRA-204ENST00000504461 ADORA2AP29274 412 aa14.79□□□□□ -0.04
PDGFRA-204ENST00000504461 SEC62Q99442 399 aaKnown RBP14.79□□□□□ -0.04
PDGFRA-204ENST00000504461 FLRT1Q9NZU1 646 aa14.79□□□□□ -0.04
PDGFRA-204ENST00000504461 PCDH10Q9P2E7 1040 aa14.79□□□□□ -0.04
PDGFRA-204ENST00000504461 ROBO3Q96MS0 1386 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 SLC25A27O95847 323 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 SLC3A2P08195 630 aaKnown RBP14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 FAM83BQ5T0W9 1011 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 LHX8Q68G74 356 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 PLEKHM2Q8IWE5 1019 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 NAPBQ9H115 298 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 NYAP2Q9P242 653 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 CLIP2Q9UDT6 1046 aa14.78□□□□□ -0.04
PDGFRA-204ENST00000504461 SALL3Q9BXA9 1300 aa14.77□□□□□ -0.04
PDGFRA-204ENST00000504461 MSCO60682 206 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 PRDM1O75626 825 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 FCER1AP12319 257 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 CYP2C19P33261 490 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 PDE4BQ07343 736 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 ZMYM1Q5SVZ6 1142 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 C7orf61Q8IZ16 206 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 EVI5LQ96CN4 794 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 EPB41L4AQ9HCS5 686 aaPredicted RBP14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 FBXO28Q9NVF7 368 aa14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.05
PDGFRA-204ENST00000504461 F5H6K3 240 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 TSPY3P0CV98 308 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 TSPY8P0CW00 308 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 FXR1P51114 621 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 KLRC3Q07444 240 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 OLFML2BQ68BL8 750 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 ABRAQ8N0Z2 381 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 DDX20Q9UHI6 824 aaKnown RBP14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 PPP1R9AQ9ULJ8 1098 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 ADAMTS5Q9UNA0 930 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 CEP290O15078 2479 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 SMCHD1A6NHR9 2005 aa14.76□□□□□ -0.05
PDGFRA-204ENST00000504461 VWA5AO00534 786 aa14.75□□□□□ -0.05
PDGFRA-204ENST00000504461 COBLO75128 1261 aa14.75□□□□□ -0.05
PDGFRA-204ENST00000504461 STAT3P40763 770 aa14.75□□□□□ -0.05
PDGFRA-204ENST00000504461 MMP19Q99542 508 aa14.75□□□□□ -0.05
PDGFRA-204ENST00000504461 NUP88Q99567 741 aaPredicted RBP14.75□□□□□ -0.05
PDGFRA-204ENST00000504461 TTLL1O95922 423 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 NDUFB10O96000 172 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 COPB2P35606 906 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 PPARAQ07869 468 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 KCTD2Q14681 263 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 RIOX2Q8IUF8 465 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 PRPF38AQ8NAV1 312 aaKnown RBP14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 MKL1Q969V6 931 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 CEP95Q96GE4 821 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 SLF1Q9BQI6 1058 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 MTMR4Q9NYA4 1195 aa14.74□□□□□ -0.05
PDGFRA-204ENST00000504461 PFASO15067 1338 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 IGKV6D-41A0A0C4DH26 115 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 ZBED4O75132 1171 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 CYBAP13498 195 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 SLC4A3P48751 1232 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 TFAP4Q01664 338 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 FAM47AQ5JRC9 791 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 CCDC129Q6ZRS4 1044 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 TRPV1Q8NER1 839 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 NEDD1Q8NHV4 660 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 MAML3Q96JK9 1138 aa14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 SENP6Q9GZR1 1112 aaPredicted RBP14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 ZMYND8Q9ULU4 1186 aaPredicted RBP14.73□□□□□ -0.05
PDGFRA-204ENST00000504461 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 HIP1O00291 1037 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 COL6A1P12109 1028 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 SYN1P17600 705 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 ARRDC4Q8NCT1 418 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 KIFC2Q96AC6 838 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 ZNF214Q9UL59 606 aaPredicted RBP14.72□□□□□ -0.05
PDGFRA-204ENST00000504461 ISY1Q9ULR0 285 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms