RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 RBCK1Q9BYM8 510 aa4.3□□□□□ -1.72
HMGB3P17-201ENST00000504195 GIPC1O14908 333 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 NRDCO43847 1150 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 PNLIPP16233 465 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 GRK4P32298 578 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 ARL4AP40617 200 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 LIMS1P48059 325 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 NCKAP1LP55160 1127 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 SMN1Q16637 294 aaKnown RBP4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 WIPI1Q5MNZ9 446 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 PCNX4Q63HM2 1172 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 PI16Q6UXB8 463 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 CEP128Q6ZU80 1094 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 DTWD2Q8NBA8 298 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 SUSD2Q9UGT4 822 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 EBF1Q9UH73 591 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 ZMYM5Q9UJ78 669 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 PCDHA5Q9Y5H7 936 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 DUSP10Q9Y6W6 482 aa4.29□□□□□ -1.72
HMGB3P17-201ENST00000504195 KIR2DL1P43626 348 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P17-201ENST00000504195 KIR2DL2P43627 348 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P17-201ENST00000504195 TEKQ02763 1124 aa4.28□□□□□ -1.72
HMGB3P17-201ENST00000504195 PDE4BQ07343 736 aa4.28□□□□□ -1.72
HMGB3P17-201ENST00000504195 RAB3GAP1Q15042 981 aa4.28□□□□□ -1.72
HMGB3P17-201ENST00000504195 DNAJB8Q8NHS0 232 aa4.28□□□□□ -1.72
HMGB3P17-201ENST00000504195 RBM15Q96T37 977 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB3P17-201ENST00000504195 ARID3CA6NKF2 412 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 PGRP06401 933 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 ERVFRD-1P60508 538 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 RASIP1Q5U651 963 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 ZNF575Q86XF7 245 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 MCATQ8IVS2 390 aaKnown RBP4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 ADGRG2Q8IZP9 1017 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 GAL3ST3Q96A11 431 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 TMEM87BQ96K49 555 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 LNPKQ9C0E8 428 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 TJP2Q9UDY2 1190 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 ZNF281Q9Y2X9 895 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 HS3ST3A1Q9Y663 406 aa4.27□□□□□ -1.73
HMGB3P17-201ENST00000504195 A0A1B0GTL3 188 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 RBM47A0AV96 593 aaKnown RBP4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 NOTOA8MTQ0 251 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 RBAK-RBAKDNI3L0D1 243 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 RPL10P27635 214 aaKnown RBP4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 INHBEP58166 350 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 TGFB2P61812 414 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 PTPN11Q06124 597 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 KLF10Q13118 480 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 RNF111Q6ZNA4 994 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 ENOX1Q8TC92 643 aaKnown RBP4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 FBF1Q8TES7 1133 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 RNF141Q8WVD5 230 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 DPH2Q9BQC3 489 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 ZNF747Q9BV97 191 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 KLHL14Q9P2G3 628 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 ADAM30Q9UKF2 790 aa4.26□□□□□ -1.73
HMGB3P17-201ENST00000504195 NUDT19A8MXV4 375 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 GFRA2O00451 464 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 EFEMP2O95967 443 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 MSL3P1P0C860 447 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 LMNB1P20700 586 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 SERPINB4P48594 390 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 CLEC16AQ2KHT3 1053 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 VWA3BQ502W6 1294 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 DIEXFQ68CQ4 756 aaKnown RBP4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 SV2BQ7L1I2 683 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 G6PC3Q9BUM1 346 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 TSC22D4Q9Y3Q8 395 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 PMF1-BGLAPU3KQ54 211 aa4.25□□□□□ -1.73
HMGB3P17-201ENST00000504195 FBXO24O75426 580 aa4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 PLATP00750 562 aa4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 ATXN1P54253 815 aaKnown RBP4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 RPS26P62854 115 aaKnown RBP4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 ENOX2Q16206 610 aaKnown RBP4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 WAPLQ7Z5K2 1190 aa4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 CCDC82Q8N4S0 544 aa4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 CYB5D2Q8WUJ1 264 aa4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 MAP6Q96JE9 813 aa4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 CDK5RAP1Q96SZ6 601 aaKnown RBP4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 ASCC2Q9H1I8 757 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 ST6GALNAC2Q9UJ37 374 aa4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 ING1Q9UK53 422 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P17-201ENST00000504195 PNMA6FA0A0J9YX94 578 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 NOBOXO60393 691 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 CELA3AP09093 270 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 HNRNPA0Q13151 305 aaKnown RBP4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 LAPTM5Q13571 262 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 TARBP2Q15633 366 aaKnown RBP4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 FNIP1Q8TF40 1166 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 ASPNQ9BXN1 380 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 FAN1Q9Y2M0 1017 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 TAF6LQ9Y6J9 622 aa4.23□□□□□ -1.73
HMGB3P17-201ENST00000504195 SH3D21A4FU49 640 aa4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 AMHP03971 560 aa4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 IGFBP6P24592 240 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 YARSP54577 528 aaKnown RBP4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 TTBK2Q6IQ55 1244 aa4.22□□□□□ -1.73
HMGB3P17-201ENST00000504195 GALNT18Q6P9A2 607 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms