RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 U2AF1L4Q8WU68 220 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 PLCB1Q9NQ66 1216 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 KIAA0232Q92628 1395 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 KIF11P52732 1056 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 CHRNDQ07001 517 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 XKR9Q5GH70 373 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 TRMT44Q8IYL2 757 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 ERO1AQ96HE7 468 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 GCC2Q8IWJ2 1684 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 I3L4J1 428 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 OATP04181 439 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 MTX1Q13505 466 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 FAM173BQ6P4H8 233 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 SND1Q7KZF4 910 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 RRAGAQ7L523 313 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 PEX26Q7Z412 305 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 SDR42E1Q8WUS8 393 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 STAMQ92783 540 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 GTF3C6Q969F1 213 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 FAM193BQ96PV7 902 aaPredicted RBP7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 RAB20Q9NX57 234 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 TBC1D8O95759 1140 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 RPS6KA1Q15418 735 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 LONRF2Q1L5Z9 754 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 SESTD1Q86VW0 696 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 FBXO11Q86XK2 927 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 RSAD2Q8WXG1 361 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 PCDHB13Q9Y5F0 798 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 USP17L12C9JPN9 530 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 USP17L21D6R901 530 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ZBTB24O43167 697 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 DDAH1O94760 285 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 MAGEA1P43355 309 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 GTF2A1P52655 376 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 EPSTI1Q96J88 318 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 IWS1Q96ST2 819 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 NUCKS1Q9H1E3 243 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 AFG3L2Q9Y4W6 797 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 MYO5CQ9NQX4 1742 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 GADD45BO75293 160 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ZNF131P52739 623 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 TTC31Q49AM3 519 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 LGSNQ5TDP6 509 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 FAM160B1Q5W0V3 765 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 PPFIBP2Q8ND30 876 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 MMS19Q96T76 1030 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 VPS37BQ9H9H4 285 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 TMEM2Q9UHN6 1383 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 MORC3Q14149 939 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 GPKOWQ92917 476 aaPredicted RBP eCLIP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 IQCDQ96DY2 449 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 CCDC94Q9BW85 323 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 CACYBPQ9HB71 228 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 SEPT10Q9P0V9 454 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 KCNJ18B7U540 433 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 KCNQ3O43525 872 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 GIGYF1O75420 1035 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 GOLGA8HP0CJ92 632 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ICA1Q05084 483 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 KCNJ12Q14500 433 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 TRIM50Q86XT4 487 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ZNF710Q8N1W2 664 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 SLF1Q9BQI6 1058 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 NFE2L3Q9Y4A8 694 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 FAM135BQ49AJ0 1406 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 NPC1L1Q9UHC9 1359 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ABL1P00519 1130 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 GBP1P32455 592 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 IFRD2Q12894 506 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 TTLL7Q6ZT98 887 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 KIAA0825Q8IV33 1275 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 MYOCDQ8IZQ8 938 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 PRPF31Q8WWY3 499 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 FAM207AQ9NSI2 230 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 OGFRQ9NZT2 677 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ADGRL2O95490 1459 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 N4BP1O75113 896 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 DMP1Q13316 513 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 MTMR3Q13615 1198 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 POLA2Q14181 598 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 CFAP221Q4G0U5 840 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 SCYL2Q6P3W7 929 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ANKRD35Q8N283 1001 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 PSMB7Q99436 277 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 ST7Q9NRC1 585 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 AMFRQ9UKV5 643 aa7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 THRAP3Q9Y2W1 955 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-205ENST00000504178 SAMD9Q5K651 1589 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 MAN1A1P33908 653 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 PDE6CP51160 858 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 SLC12A2P55011 1212 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 IGBP1P78318 339 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 ITKQ08881 620 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 NEDD9Q14511 834 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 EP400NLQ6ZTU2 488 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 TACC3Q9Y6A5 838 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 MYOM2P54296 1465 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 ADCY9O60503 1353 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 MAP3K15Q6ZN16 1313 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms