RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 RNF34Q969K3 372 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 DDX23Q9BUQ8 820 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 CIB2O75838 187 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 SCG2P13521 617 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 ADKP55263 362 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 GTF2IP78347 998 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 WHAMMP3Q1A5X7 153 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 TPH2Q8IWU9 490 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 PNMA1Q8ND90 353 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 TRIM58Q8NG06 486 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 SAR1BQ9Y6B6 198 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 OTUD6AQ7L8S5 288 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 SMC1BQ8NDV3 1235 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 STMN2Q93045 179 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 RASSF4Q9H2L5 321 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 PCDHB13Q9Y5F0 798 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 UNC13BO14795 1591 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 DAPK3O43293 454 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 XRCC5P13010 732 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 C10orf67Q8IYJ2 551 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 MAP4K1Q92918 833 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 CIAO1O76071 339 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 GPBP1Q86WP2 473 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 CCDC105Q8IYK2 499 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 OSBPL3Q9H4L5 887 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 GPHNQ9NQX3 736 aaPredicted RBP18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 FEZ2Q9UHY8 353 aaPredicted RBP18.28■□□□□ 0.52
PCDHA1-203ENST00000504120 ERCC3P19447 782 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 LRRC24Q50LG9 513 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 DDX17Q92841 729 aaKnown RBP18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 MRFAP1L1Q96HT8 127 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 TRIM6Q9C030 488 aaPredicted RBP18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 PLCB1Q9NQ66 1216 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 FAM184BQ9ULE4 1060 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 H7C1D1 291 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 GYG1P46976 350 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 LSM14BQ9BX40 385 aaKnown RBP18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 PSTPIP2Q9H939 334 aa18.27■□□□□ 0.52
PCDHA1-203ENST00000504120 CCDC160A6NGH7 325 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 GTPBP6O43824 516 aaPredicted RBP18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 OR52Z1P0C646 297 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 PDIA3P30101 505 aaKnown RBP18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 BCAMP50895 628 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 ITIH3Q06033 890 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 SLFN12Q8IYM2 578 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 PSMB7Q99436 277 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 PARP2Q9UGN5 583 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 PCDHA7Q9UN72 937 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 STAT1P42224 750 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 NIM1KQ8IY84 436 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 UBE2Q2Q8WVN8 375 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 RAB17Q9H0T7 212 aa18.27■□□□□ 0.51
PCDHA1-203ENST00000504120 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 USTQ9Y2C2 406 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 MAP3K15Q6ZN16 1313 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 SND1Q7KZF4 910 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 MIER3Q7Z3K6 550 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 GOLGA5Q8TBA6 731 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 SDR42E1Q8WUS8 393 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 CD19P15391 556 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 YWHAEP62258 255 aaKnown RBP18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 LGSNQ5TDP6 509 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 CMTR1Q8N1G2 835 aaKnown RBP18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 AMFRQ9UKV5 643 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 PCDHA12Q9UN75 941 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 NOD1Q9Y239 953 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 ATP11AP98196 1134 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 BRD3Q15059 726 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 ERCC6LQ2NKX8 1250 aa18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 RSRC1Q96IZ7 334 aaKnown RBP18.26■□□□□ 0.51
PCDHA1-203ENST00000504120 KLRF2D3W0D1 207 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 TECP42680 631 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 A0A1W2PQ27 194 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 A0A1W2PQ64 194 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 A0A1W2PQD8 194 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 ARHGAP44Q17R89 818 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 UIMC1Q96RL1 719 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 GMNNO75496 209 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 PDE8BO95263 885 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 CHRNDQ07001 517 aa18.25■□□□□ 0.51
PCDHA1-203ENST00000504120 LONP1P36776 959 aaKnown RBP18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 FBXO18Q8NFZ0 1043 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 CCT6BQ92526 530 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 USP6P35125 1406 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 BTBD18B2RXH4 712 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 SPATA1Q5VX52 437 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 MRRFQ96E11 262 aaKnown RBP18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 MYO1AQ9UBC5 1043 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 ECM2O94769 699 aaPredicted RBP18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 GINS2Q9Y248 185 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms