RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 LUC7LQ9NQ29 371 aaKnown RBP6.65□□□□□ -1.34
LINC01340-201ENST00000504012 CREBZFQ9NS37 354 aa6.65□□□□□ -1.34
LINC01340-201ENST00000504012 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.65□□□□□ -1.34
LINC01340-201ENST00000504012 HAUS2Q9NVX0 235 aa6.65□□□□□ -1.34
LINC01340-201ENST00000504012 FANCLQ9NW38 375 aa6.65□□□□□ -1.34
LINC01340-201ENST00000504012 KIAA1522Q9P206 1035 aaPredicted RBP6.65□□□□□ -1.34
LINC01340-201ENST00000504012 SWAP70Q9UH65 585 aa6.65□□□□□ -1.34
LINC01340-201ENST00000504012 SYNPO2Q9UMS6 1093 aa6.65□□□□□ -1.34
LINC01340-201ENST00000504012 CTDP1Q9Y5B0 961 aaPredicted RBP6.65□□□□□ -1.34
LINC01340-201ENST00000504012 ITIH6Q6UXX5 1313 aa6.65□□□□□ -1.35
LINC01340-201ENST00000504012 MAP3K15Q6ZN16 1313 aa6.65□□□□□ -1.35
LINC01340-201ENST00000504012 ANKARQ7Z5J8 1434 aa6.65□□□□□ -1.35
LINC01340-201ENST00000504012 MAGI1Q96QZ7 1491 aaPredicted RBP6.65□□□□□ -1.35
LINC01340-201ENST00000504012 FRMD3A2A2Y4 597 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 CCT8L1PA6NM43 557 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 TMEM232C9JQI7 657 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 IFIT3O14879 490 aaKnown RBP6.64□□□□□ -1.35
LINC01340-201ENST00000504012 TRAPPC3O43617 180 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 SH3BP5O60239 455 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 CEP104O60308 925 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 MAP4K4O95819 1239 aaPredicted RBP6.64□□□□□ -1.35
LINC01340-201ENST00000504012 ZFXP17010 805 aaPredicted RBP6.64□□□□□ -1.35
LINC01340-201ENST00000504012 GJA8P48165 433 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 APLP1P51693 650 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 MXRA7P84157 204 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 PDCLQ13371 301 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 BIRC3Q13489 604 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 TRIM14Q14142 442 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 ITIH4Q14624 930 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 MYBPC3Q14896 1274 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 KARSQ15046 597 aaKnown RBP6.64□□□□□ -1.35
LINC01340-201ENST00000504012 WASHC4Q2M389 1173 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 Q4G0T1 1027 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 TTMPQ5BVD1 217 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 PPFIBP1Q86W92 1011 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 UNC5CLQ8IV45 518 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 CNGA4Q8IV77 575 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 LRRC43Q8N309 656 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 NECAB1Q8N987 351 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 TRIML1Q8N9V2 468 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 CCDC63Q8NA47 563 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 C8orf58Q8NAV2 365 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 MLKLQ8NB16 471 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 KLHDC4Q8TBB5 520 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 PI4K2BQ8TCG2 481 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 SH3TC2Q8TF17 1288 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 MAIP1Q8WWC4 291 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 RIN2Q8WYP3 895 aaPredicted RBP6.64□□□□□ -1.35
LINC01340-201ENST00000504012 NCSTNQ92542 709 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 DPF2Q92785 391 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 BRF1Q92994 677 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 OPTNQ96CV9 577 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 HVCN1Q96D96 273 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 STAMBPL1Q96FJ0 436 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 SEC16BQ96JE7 1060 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 MEIS3Q99687 375 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 SLC12A5Q9H2X9 1139 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 VCXQ9H320 206 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 VCX3BQ9H321 246 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 VCX3AQ9NNX9 186 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 POLR3EQ9NVU0 708 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 BAIAP2L1Q9UHR4 511 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 WWC3Q9ULE0 1092 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 PCDHA7Q9UN72 937 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 SLC12A4Q9UP95 1085 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 USTQ9Y2C2 406 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 SAR1BQ9Y6B6 198 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 COMMD10Q9Y6G5 202 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 NEDD4P46934 1319 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 NPATQ14207 1427 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 VWDEQ8N2E2 1590 aa6.64□□□□□ -1.35
LINC01340-201ENST00000504012 A0A1B0GTH6 734 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 A0A1B0GVL5 298 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ASAP2O43150 1006 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 GLRX3O76003 335 aaKnown RBP6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ATP10BO94823 1461 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
LINC01340-201ENST00000504012 HARSP12081 509 aaKnown RBP6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ATP1A3P13637 1013 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ZNF24P17028 368 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 VCAM1P19320 739 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 NR1D1P20393 614 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 RXRBP28702 533 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
LINC01340-201ENST00000504012 CASP14P31944 242 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 PBX1P40424 430 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ME1P48163 572 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ZNF131P52739 623 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ZC3H6P61129 1189 aaKnown RBP6.63□□□□□ -1.35
LINC01340-201ENST00000504012 PHEXP78562 749 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 MRPS25P82663 173 aaKnown RBP6.63□□□□□ -1.35
LINC01340-201ENST00000504012 MAP3K12Q12852 859 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 SKIDA1Q1XH10 827 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 ADCK5Q3MIX3 580 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 PPP1R15BQ5SWA1 713 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 FRMPD1Q5SYB0 1578 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 CFAP58Q5T655 872 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 AGBL2Q5U5Z8 902 aa6.63□□□□□ -1.35
LINC01340-201ENST00000504012 GKAP1Q5VSY0 366 aaPredicted RBP6.63□□□□□ -1.35
LINC01340-201ENST00000504012 NUTM2DQ5VT03 806 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms