RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 MCM7P33993 719 aa25.65■■□□□ 1.7
PCDH1-204ENST00000503492 FANCCQ00597 558 aa25.65■■□□□ 1.7
PCDH1-204ENST00000503492 FLAD1Q8NFF5 587 aa25.65■■□□□ 1.7
PCDH1-204ENST00000503492 RASGRP4Q8TDF6 673 aa25.65■■□□□ 1.7
PCDH1-204ENST00000503492 MASTLQ96GX5 879 aa25.65■■□□□ 1.7
PCDH1-204ENST00000503492 TTF2Q9UNY4 1162 aaKnown RBP25.65■■□□□ 1.7
PCDH1-204ENST00000503492 QSER1Q2KHR3 1735 aa25.65■■□□□ 1.7
PCDH1-204ENST00000503492 KLRF2D3W0D1 207 aa25.64■■□□□ 1.7
PCDH1-204ENST00000503492 M0R2N6 131 aa25.64■■□□□ 1.7
PCDH1-204ENST00000503492 MORC3Q14149 939 aa25.64■■□□□ 1.7
PCDH1-204ENST00000503492 MSL1Q68DK7 614 aa25.64■■□□□ 1.7
PCDH1-204ENST00000503492 SPATA20Q8TB22 786 aa25.64■■□□□ 1.7
PCDH1-204ENST00000503492 LZTS2Q9BRK4 669 aa25.64■■□□□ 1.7
PCDH1-204ENST00000503492 ZNF772Q68DY9 489 aaPredicted RBP25.64■■□□□ 1.7
PCDH1-204ENST00000503492 CPVLQ9H3G5 476 aa25.64■■□□□ 1.7
PCDH1-204ENST00000503492 STXBP3O00186 592 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 NEMFO60524 1076 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 NOVP48745 357 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 IL17AQ16552 155 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 HEATR3Q7Z4Q2 680 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 OSBPL5Q9H0X9 879 aaPredicted RBP25.63■■□□□ 1.69
PCDH1-204ENST00000503492 DDX4Q9NQI0 724 aaKnown RBP25.63■■□□□ 1.69
PCDH1-204ENST00000503492 BARHL2Q9NY43 387 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 SLFN14P0C7P3 912 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 TOP1P11387 765 aaKnown RBP25.63■■□□□ 1.69
PCDH1-204ENST00000503492 SH3RF1Q7Z6J0 888 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 SPZ1Q9BXG8 430 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 IMPACTQ9P2X3 320 aa25.63■■□□□ 1.69
PCDH1-204ENST00000503492 GABPAQ06546 454 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 TRIML1Q8N9V2 468 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 DAGLBQ8NCG7 672 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 PARP1P09874 1014 aaKnown RBP25.62■■□□□ 1.69
PCDH1-204ENST00000503492 USP17L2Q6R6M4 530 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 CCDC148Q8NFR7 591 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 FANCLQ9NW38 375 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 PCDHA6Q9UN73 950 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 PCDHA8Q9Y5H6 950 aa25.62■■□□□ 1.69
PCDH1-204ENST00000503492 UQCRHLA0A096LP55 91 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 UQCRHP07919 91 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 SCNN1DP51172 638 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 C4orf32Q8N8J7 132 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 MLKLQ8NB16 471 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 PAGE5Q96GU1 130 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 AFMP43652 599 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 CCZ1BP86790 482 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 CCZ1P86791 482 aaPredicted RBP25.61■■□□□ 1.69
PCDH1-204ENST00000503492 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
PCDH1-204ENST00000503492 TMC6Q7Z403 805 aa25.61■■□□□ 1.69
PCDH1-204ENST00000503492 GSDMDP57764 484 aa25.6■■□□□ 1.69
PCDH1-204ENST00000503492 DPF2Q92785 391 aa25.6■■□□□ 1.69
PCDH1-204ENST00000503492 ZNF622Q969S3 477 aaKnown RBP eCLIP25.6■■□□□ 1.69
PCDH1-204ENST00000503492 USP40Q9NVE5 1235 aa25.6■■□□□ 1.69
PCDH1-204ENST00000503492 ADAMTSL1Q8N6G6 1762 aa25.6■■□□□ 1.69
PCDH1-204ENST00000503492 PLIN4Q96Q06 1357 aa25.6■■□□□ 1.69
PCDH1-204ENST00000503492 FMR1Q06787 632 aaKnown RBP eCLIP25.6■■□□□ 1.69
PCDH1-204ENST00000503492 GALNT17Q6IS24 598 aa25.6■■□□□ 1.69
PCDH1-204ENST00000503492 CCDC34Q96HJ3 373 aa25.59■■□□□ 1.69
PCDH1-204ENST00000503492 TMX4Q9H1E5 349 aaPredicted RBP25.59■■□□□ 1.69
PCDH1-204ENST00000503492 CCDC194A0A1B0GVG4 234 aa25.59■■□□□ 1.69
PCDH1-204ENST00000503492 SKILP12757 684 aa25.59■■□□□ 1.69
PCDH1-204ENST00000503492 CASP1P29466 404 aa25.59■■□□□ 1.69
PCDH1-204ENST00000503492 DACH1Q9UI36 760 aa25.59■■□□□ 1.69
PCDH1-204ENST00000503492 G3V3G9 751 aa25.58■■□□□ 1.69
PCDH1-204ENST00000503492 UBASH3AP57075 661 aa25.58■■□□□ 1.69
PCDH1-204ENST00000503492 E2F4Q16254 413 aa25.58■■□□□ 1.69
PCDH1-204ENST00000503492 DCAF8Q5TAQ9 597 aa25.58■■□□□ 1.69
PCDH1-204ENST00000503492 ARL6IP4Q66PJ3 421 aaKnown RBP25.58■■□□□ 1.69
PCDH1-204ENST00000503492 USP17L5A8MUK1 530 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 MYO1BO43795 1136 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 AKR1B1P15121 316 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 CDC42EP5Q6NZY7 148 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 PRIMPOLQ96LW4 560 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 MED15Q96RN5 788 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 KCNQ5Q9NR82 932 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 MTMR4Q9NYA4 1195 aa25.58■■□□□ 1.68
PCDH1-204ENST00000503492 SERPINC1P01008 464 aa25.57■■□□□ 1.68
PCDH1-204ENST00000503492 DPYDQ12882 1025 aa25.57■■□□□ 1.68
PCDH1-204ENST00000503492 HHIPL2Q6UWX4 724 aa25.57■■□□□ 1.68
PCDH1-204ENST00000503492 DBNDD1Q9H9R9 158 aa25.57■■□□□ 1.68
PCDH1-204ENST00000503492 SMARCA1P28370 1054 aa25.56■■□□□ 1.68
PCDH1-204ENST00000503492 INF2Q27J81 1249 aa25.56■■□□□ 1.68
PCDH1-204ENST00000503492 APOBEC3HQ6NTF7 200 aaKnown RBP25.56■■□□□ 1.68
PCDH1-204ENST00000503492 HOMER1Q86YM7 354 aa25.56■■□□□ 1.68
PCDH1-204ENST00000503492 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
PCDH1-204ENST00000503492 FAM177A1Q8N128 213 aaPredicted RBP25.56■■□□□ 1.68
PCDH1-204ENST00000503492 ENOX1Q8TC92 643 aaKnown RBP25.56■■□□□ 1.68
PCDH1-204ENST00000503492 ZMYND12Q9H0C1 365 aa25.56■■□□□ 1.68
PCDH1-204ENST00000503492 ARMCX5Q6P1M9 558 aa25.56■■□□□ 1.68
PCDH1-204ENST00000503492 TEKT1Q969V4 418 aa25.56■■□□□ 1.68
PCDH1-204ENST00000503492 RRP36Q96EU6 259 aaKnown RBP25.56■■□□□ 1.68
PCDH1-204ENST00000503492 IGKV6D-41A0A0C4DH26 115 aa25.55■■□□□ 1.68
PCDH1-204ENST00000503492 PDHBP11177 359 aa25.55■■□□□ 1.68
PCDH1-204ENST00000503492 NAPAP54920 295 aa25.55■■□□□ 1.68
PCDH1-204ENST00000503492 TRMT44Q8IYL2 757 aaKnown RBP25.55■■□□□ 1.68
PCDH1-204ENST00000503492 CBFA2T2O43439 604 aa25.55■■□□□ 1.68
PCDH1-204ENST00000503492 LONP1P36776 959 aaKnown RBP25.55■■□□□ 1.68
PCDH1-204ENST00000503492 MYRIPQ8NFW9 859 aa25.55■■□□□ 1.68
PCDH1-204ENST00000503492 VAT1LQ9HCJ6 419 aa25.55■■□□□ 1.68
PCDH1-204ENST00000503492 SERPINB13Q9UIV8 391 aa25.55■■□□□ 1.68
PCDH1-204ENST00000503492 NFE2L3Q9Y4A8 694 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms