RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CHRDL2Q6WN34 429 aa23.19■■□□□ 1.3
UBE2D3-215ENST00000503418 SHCBP1Q8NEM2 672 aa23.19■■□□□ 1.3
UBE2D3-215ENST00000503418 NBPF3Q9H094 633 aa23.19■■□□□ 1.3
UBE2D3-215ENST00000503418 FRMPD3Q5JV73 1810 aa23.19■■□□□ 1.3
UBE2D3-215ENST00000503418 STRNO43815 780 aa23.18■■□□□ 1.3
UBE2D3-215ENST00000503418 TMEM132BQ14DG7 1078 aa23.18■■□□□ 1.3
UBE2D3-215ENST00000503418 C11orf49Q9H6J7 331 aa23.18■■□□□ 1.3
UBE2D3-215ENST00000503418 NYAP2Q9P242 653 aa23.18■■□□□ 1.3
UBE2D3-215ENST00000503418 CYP2C19P33261 490 aa23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 MNX1P50219 401 aaPredicted RBP23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 PDE1AP54750 535 aa23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 CCDC129Q6ZRS4 1044 aa23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 EVI5LQ96CN4 794 aa23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 NUP88Q99567 741 aaPredicted RBP23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 MROH8Q9H579 483 aa23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 CLIP2Q9UDT6 1046 aa23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 PPP1R9AQ9ULJ8 1098 aa23.17■■□□□ 1.3
UBE2D3-215ENST00000503418 ZNFX1Q9P2E3 1918 aaKnown RBP23.16■■□□□ 1.3
UBE2D3-215ENST00000503418 SLC3A2P08195 630 aaKnown RBP23.16■■□□□ 1.3
UBE2D3-215ENST00000503418 CNGA1P29973 690 aa23.16■■□□□ 1.3
UBE2D3-215ENST00000503418 PDE4BQ07343 736 aa23.16■■□□□ 1.3
UBE2D3-215ENST00000503418 LHX8Q68G74 356 aa23.16■■□□□ 1.3
UBE2D3-215ENST00000503418 STAP2Q9UGK3 403 aa23.16■■□□□ 1.3
UBE2D3-215ENST00000503418 IGKV6D-41A0A0C4DH26 115 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 F5H6K3 240 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 SLC25A27O95847 323 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 KLRC3Q07444 240 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 PPARAQ07869 468 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 AAMPQ13685 434 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 CEP95Q96GE4 821 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 LNPKQ9C0E8 428 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 SLC5A4Q9NY91 659 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 ADAMTS5Q9UNA0 930 aa23.15■■□□□ 1.3
UBE2D3-215ENST00000503418 VWA5AO00534 786 aa23.14■■□□□ 1.29
UBE2D3-215ENST00000503418 COBLO75128 1261 aa23.14■■□□□ 1.29
UBE2D3-215ENST00000503418 NDUFB10O96000 172 aa23.14■■□□□ 1.29
UBE2D3-215ENST00000503418 TSPY3P0CV98 308 aa23.14■■□□□ 1.29
UBE2D3-215ENST00000503418 TSPY8P0CW00 308 aa23.14■■□□□ 1.29
UBE2D3-215ENST00000503418 C7orf61Q8IZ16 206 aa23.14■■□□□ 1.29
UBE2D3-215ENST00000503418 FCER1AP12319 257 aa23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 FAM47AQ5JRC9 791 aa23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 OLFML2BQ68BL8 750 aa23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 B4GALNT3Q6L9W6 998 aa23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 ABRAQ8N0Z2 381 aa23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 SLF1Q9BQI6 1058 aa23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 RWDD1Q9H446 243 aaPredicted RBP23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 MTMR4Q9NYA4 1195 aa23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 DDX20Q9UHI6 824 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-215ENST00000503418 TTLL1O95922 423 aa23.12■■□□□ 1.29
UBE2D3-215ENST00000503418 STAT3P40763 770 aa23.12■■□□□ 1.29
UBE2D3-215ENST00000503418 RIOX2Q8IUF8 465 aa23.12■■□□□ 1.29
UBE2D3-215ENST00000503418 LRRC47Q8N1G4 583 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-215ENST00000503418 MMP19Q99542 508 aa23.12■■□□□ 1.29
UBE2D3-215ENST00000503418 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-215ENST00000503418 PLIN4Q96Q06 1357 aa23.12■■□□□ 1.29
UBE2D3-215ENST00000503418 PFASO15067 1338 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 FOXP2O15409 715 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 CYBAP13498 195 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 FXR1P51114 621 aaKnown RBP eCLIP23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 TFAP4Q01664 338 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 CTDSPL2Q05D32 466 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 TRPV1Q8NER1 839 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 REPS2Q8NFH8 660 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 NEDD1Q8NHV4 660 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 ZNF214Q9UL59 606 aaPredicted RBP23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 PLXNA1Q9UIW2 1896 aa23.11■■□□□ 1.29
UBE2D3-215ENST00000503418 TRIOBPQ9H2D6 2365 aa23.1■■□□□ 1.29
UBE2D3-215ENST00000503418 TRIM6-TRIM34B2RNG4 842 aa23.1■■□□□ 1.29
UBE2D3-215ENST00000503418 MSCO60682 206 aa23.1■■□□□ 1.29
UBE2D3-215ENST00000503418 VPS53Q5VIR6 699 aa23.1■■□□□ 1.29
UBE2D3-215ENST00000503418 HELLSQ9NRZ9 838 aa23.1■■□□□ 1.29
UBE2D3-215ENST00000503418 ISY1Q9ULR0 285 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-215ENST00000503418 IGHA2P01877 340 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 COPB2P35606 906 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 KCTD2Q14681 263 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 SMC5Q8IY18 1101 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 PRPF38AQ8NAV1 312 aaKnown RBP23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 MKL1Q969V6 931 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 RILPL2Q969X0 211 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 MAML3Q96JK9 1138 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 FAM227BQ96M60 508 aa23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 ZMYND8Q9ULU4 1186 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 CTDP1Q9Y5B0 961 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-215ENST00000503418 A0A0D9SFI3 127 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 TSPY2A6NKD2 308 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 IGHDP01880 384 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 PGK2P07205 417 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 COL6A1P12109 1028 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 SLC4A3P48751 1232 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 SNRNP48Q6IEG0 339 aaKnown RBP23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 GMCL1P1Q8NEA9 526 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 KIFC2Q96AC6 838 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 TEX13BQ9BXU2 312 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 SYNPO2Q9UMS6 1093 aa23.08■■□□□ 1.29
UBE2D3-215ENST00000503418 ZBED4O75132 1171 aa23.07■■□□□ 1.28
UBE2D3-215ENST00000503418 MCMDC2Q4G0Z9 681 aa23.07■■□□□ 1.28
UBE2D3-215ENST00000503418 PRAMEF19Q5SWL8 479 aa23.07■■□□□ 1.28
UBE2D3-215ENST00000503418 ANO1Q5XXA6 986 aa23.07■■□□□ 1.28
UBE2D3-215ENST00000503418 SLFN13Q68D06 897 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms