RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 BTBD7Q9P203 1132 aa21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 ADAMTS5Q9UNA0 930 aa21.49■■□□□ 1.03
PDLIM7-209ENST00000503346 TOP1P11387 765 aaKnown RBP21.48■■□□□ 1.03
PDLIM7-209ENST00000503346 CCDC178Q5BJE1 867 aa21.48■■□□□ 1.03
PDLIM7-209ENST00000503346 RCSD1Q6JBY9 416 aa21.48■■□□□ 1.03
PDLIM7-209ENST00000503346 IQCA1Q86XH1 822 aa21.48■■□□□ 1.03
PDLIM7-209ENST00000503346 TMEM47Q9BQJ4 181 aa21.48■■□□□ 1.03
PDLIM7-209ENST00000503346 ZSWIM5Q9P217 1185 aa21.48■■□□□ 1.03
PDLIM7-209ENST00000503346 PPP1R9AQ9ULJ8 1098 aa21.48■■□□□ 1.03
PDLIM7-209ENST00000503346 BMP3P12645 472 aa21.47■■□□□ 1.03
PDLIM7-209ENST00000503346 MAPK4P31152 587 aa21.47■■□□□ 1.03
PDLIM7-209ENST00000503346 CCNA1P78396 465 aa21.47■■□□□ 1.03
PDLIM7-209ENST00000503346 DGKHQ86XP1 1220 aa21.47■■□□□ 1.03
PDLIM7-209ENST00000503346 COA7Q96BR5 231 aa21.47■■□□□ 1.03
PDLIM7-209ENST00000503346 PTCH2Q9Y6C5 1203 aa21.47■■□□□ 1.03
PDLIM7-209ENST00000503346 TAF6LQ9Y6J9 622 aa21.47■■□□□ 1.03
PDLIM7-209ENST00000503346 ZSWIM8A7E2V4 1837 aa21.46■■□□□ 1.03
PDLIM7-209ENST00000503346 PRKCZQ05513 592 aa21.46■■□□□ 1.03
PDLIM7-209ENST00000503346 TRDNQ13061 729 aa21.46■■□□□ 1.03
PDLIM7-209ENST00000503346 ANKS1AQ92625 1134 aa21.46■■□□□ 1.03
PDLIM7-209ENST00000503346 SLF1Q9BQI6 1058 aa21.46■■□□□ 1.03
PDLIM7-209ENST00000503346 PORCNQ9H237 461 aa21.46■■□□□ 1.03
PDLIM7-209ENST00000503346 FEM1BQ9UK73 627 aa21.46■■□□□ 1.03
PDLIM7-209ENST00000503346 E7EWF7 191 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 MCCP23508 829 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 SLC1A4P43007 532 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 NECTIN1Q15223 517 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 STOX1Q6ZVD7 989 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 PRPF38AQ8NAV1 312 aaKnown RBP21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 DCAF4Q8WV16 495 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 ZSCAN10Q96SZ4 725 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 ZKSCAN3Q9BRR0 538 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 GABRQQ9UN88 632 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 RLFQ13129 1914 aa21.45■■□□□ 1.02
PDLIM7-209ENST00000503346 VWA5AO00534 786 aa21.44■■□□□ 1.02
PDLIM7-209ENST00000503346 SLC27A2O14975 620 aa21.44■■□□□ 1.02
PDLIM7-209ENST00000503346 FLT3LGP49771 235 aa21.44■■□□□ 1.02
PDLIM7-209ENST00000503346 REPS2Q8NFH8 660 aa21.44■■□□□ 1.02
PDLIM7-209ENST00000503346 SPATC1LQ9H0A9 340 aa21.44■■□□□ 1.02
PDLIM7-209ENST00000503346 GJD2Q9UKL4 321 aa21.44■■□□□ 1.02
PDLIM7-209ENST00000503346 HTTP42858 3142 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 PLA2G6O60733 806 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 IRF5Q13568 498 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 TMEM132BQ14DG7 1078 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 CREB3L3Q68CJ9 461 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 SAMD1Q6SPF0 538 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 CYB5R4Q7L1T6 521 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 GPR142Q7Z601 462 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 RALYLQ86SE5 291 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 CCAR1Q8IX12 1150 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 ENAHQ8N8S7 591 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 SHCBP1Q8NEM2 672 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 NCOA7Q8NI08 942 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 RAET1EQ8TD07 263 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 ARMC5Q96C12 935 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 UBAC1Q9BSL1 405 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 MOV10L1Q9BXT6 1211 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 TNKSO95271 1327 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 A0A0G2JMZ2 1700 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 MYH4Q9Y623 1939 aa21.43■■□□□ 1.02
PDLIM7-209ENST00000503346 TMEM232C9JQI7 657 aa21.42■■□□□ 1.02
PDLIM7-209ENST00000503346 STAT2P52630 851 aa21.42■■□□□ 1.02
PDLIM7-209ENST00000503346 PLEKHH3Q7Z736 793 aa21.42■■□□□ 1.02
PDLIM7-209ENST00000503346 FAM160B2Q86V87 743 aa21.42■■□□□ 1.02
PDLIM7-209ENST00000503346 CHURC1Q8WUH1 139 aa21.42■■□□□ 1.02
PDLIM7-209ENST00000503346 ZNF214Q9UL59 606 aaPredicted RBP21.42■■□□□ 1.02
PDLIM7-209ENST00000503346 SNHG28P0DPA3 235 aa21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 PDHBP11177 359 aa21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 SLC9C1Q4G0N8 1177 aa21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 IFFO2Q5TF58 517 aa21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 RASGRP2Q7LDG7 609 aa21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 MB21D2Q8IYB1 491 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 SOCS4Q8WXH5 440 aa21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 KIFC2Q96AC6 838 aa21.41■■□□□ 1.02
PDLIM7-209ENST00000503346 ATP2A1O14983 1001 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 FDX1P10109 184 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 SEC23AQ15436 765 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 MORN1Q5T089 497 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 RNF20Q5VTR2 975 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 KCTD1Q719H9 257 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 PXYLP1Q8TE99 480 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 NUDT12Q9BQG2 462 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 KAT14Q9H8E8 782 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 SLC38A10Q9HBR0 1119 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 ISY1Q9ULR0 285 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 MTMR7Q9Y216 660 aa21.4■■□□□ 1.02
PDLIM7-209ENST00000503346 CCDC85CA6NKD9 419 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 ZBED4O75132 1171 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 SLC25A27O95847 323 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 ERCC3P19447 782 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 GRK4P32298 578 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 STAT3P40763 770 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 PLS1Q14651 629 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 CCDC96Q2M329 555 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 BTNL9Q6UXG8 535 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 NBPF11Q86T75 865 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 RIOX2Q8IUF8 465 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 SLAIN1Q8ND83 568 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 PNMA1Q8ND90 353 aa21.39■■□□□ 1.01
PDLIM7-209ENST00000503346 USP6NLQ92738 828 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms