RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 CDX2Q99626 313 aaPredicted RBP5.37□□□□□ -1.55
MATR3-202ENST00000502422 PFASO15067 1338 aa5.37□□□□□ -1.55
MATR3-202ENST00000502422 PHF20L1A8MW92 1017 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 LILRB3O75022 631 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 LDHBP07195 334 aaKnown RBP5.36□□□□□ -1.55
MATR3-202ENST00000502422 TAF3Q5VWG9 929 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 NUDT12Q9BQG2 462 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 SENP6Q9GZR1 1112 aaPredicted RBP5.36□□□□□ -1.55
MATR3-202ENST00000502422 PCDHGC3Q9UN70 934 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 SPTBN5Q9NRC6 3674 aaKnown RBP5.36□□□□□ -1.55
MATR3-202ENST00000502422 MUC3AQ02505 3323 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 CDH23Q9H251 3354 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 FOSL2P15408 326 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 MCM5P33992 734 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 GTF2F1P35269 517 aaKnown RBP eCLIP5.36□□□□□ -1.55
MATR3-202ENST00000502422 ZNF445P59923 1031 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 SLFN5Q08AF3 891 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 PDE3AQ14432 1141 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 LRRC26Q2I0M4 334 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 LRRC24Q50LG9 513 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 TREML2Q5T2D2 321 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 CERS3Q8IU89 383 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 SMC5Q8IY18 1101 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 TRMT44Q8IYL2 757 aaKnown RBP5.36□□□□□ -1.55
MATR3-202ENST00000502422 MRPL50Q8N5N7 158 aaKnown RBP5.36□□□□□ -1.55
MATR3-202ENST00000502422 TRIB2Q92519 343 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 CLUAP1Q96AJ1 413 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 SRCIN1Q9C0H9 1055 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 SEMA6BQ9H3T3 888 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 UPF2Q9HAU5 1272 aaKnown RBP5.36□□□□□ -1.55
MATR3-202ENST00000502422 SNRKQ9NRH2 765 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 GJD2Q9UKL4 321 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 MYH13Q9UKX3 1938 aa5.36□□□□□ -1.55
MATR3-202ENST00000502422 ENTPD3O75355 529 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 BCAR3O75815 825 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 ALDH1L1O75891 902 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 SLC5A1P13866 664 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 ZKSCAN1P17029 563 aaPredicted RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 PRDX5P30044 214 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 IRX3P78415 501 aaPredicted RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 MAP3K12Q12852 859 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 SPP2Q13103 211 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 PICALMQ13492 652 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 PUM3Q15397 648 aaKnown RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 CLEC17AQ6ZS10 378 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 ZFPM1Q8IX07 1006 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 SLF2Q8IX21 1173 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 ATXN2LQ8WWM7 1075 aaKnown RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 SOCS4Q8WXH5 440 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 MYLIPQ8WY64 445 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 SUCLG2Q96I99 432 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 C22orf23Q9BZE7 217 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 RBSNQ9H1K0 784 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 GNL3LQ9NVN8 582 aaKnown RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 PTPRFP10586 1907 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 RNF40O75150 1001 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 CFHP08603 1231 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 COL6A1P12109 1028 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 XRCC5P13010 732 aaKnown RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 HMGCS2P54868 508 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 USP46P62068 366 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 CACNB2Q08289 660 aaPredicted RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 SLC20A2Q08357 652 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 FUT2Q10981 343 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 KLHL40Q2TBA0 621 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 CCDC84Q86UT8 332 aaPredicted RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 TEX2Q8IWB9 1127 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 ZNF280CQ8ND82 737 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 ASCC2Q9H1I8 757 aaPredicted RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.35□□□□□ -1.55
MATR3-202ENST00000502422 AS3MTQ9HBK9 375 aa5.35□□□□□ -1.55
MATR3-202ENST00000502422 CGNQ9P2M7 1197 aaKnown RBP5.35□□□□□ -1.55
MATR3-202ENST00000502422 DOCK2Q92608 1830 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 VAMP4O75379 141 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 NBPF7P0C2Y1 421 aaPredicted RBP5.34□□□□□ -1.55
MATR3-202ENST00000502422 FDX1P10109 184 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 CNGA1P29973 690 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 MAP3K21Q5TCX8 1036 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 DZIP1Q86YF9 867 aaKnown RBP5.34□□□□□ -1.55
MATR3-202ENST00000502422 WWC1Q8IX03 1113 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 ZGPATQ8N5A5 531 aaKnown RBP5.34□□□□□ -1.55
MATR3-202ENST00000502422 GPRC5AQ8NFJ5 357 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 LPIN2Q92539 896 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 SNX21Q969T3 373 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 IDI2Q9BXS1 227 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 BICC1Q9H694 974 aaKnown RBP5.34□□□□□ -1.55
MATR3-202ENST00000502422 PRDM5Q9NQX1 630 aaPredicted RBP5.34□□□□□ -1.55
MATR3-202ENST00000502422 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.34□□□□□ -1.55
MATR3-202ENST00000502422 KIF16BQ96L93 1317 aa5.34□□□□□ -1.55
MATR3-202ENST00000502422 DDTLA6NHG4 134 aaPredicted RBP5.34□□□□□ -1.56
MATR3-202ENST00000502422 CCND3P30281 292 aaPredicted RBP5.34□□□□□ -1.56
MATR3-202ENST00000502422 MAPK4P31152 587 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 RGS2P41220 211 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 DOCK1Q14185 1865 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 SHHQ15465 462 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 VGLL2Q8N8G2 317 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 KLHDC4Q8TBB5 520 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 SECISBP2LQ93073 1101 aaKnown RBP5.34□□□□□ -1.56
MATR3-202ENST00000502422 POM121Q96HA1 1249 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms