RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 GTF3C6Q969F1 213 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 SLKQ9H2G2 1235 aaPredicted RBP22.8■■□□□ 1.24
LINC01550-201ENST00000499006 ABT1Q9ULW3 272 aaKnown RBP22.8■■□□□ 1.24
LINC01550-201ENST00000499006 CDC27P30260 824 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 CCT2P78371 535 aaKnown RBP22.79■■□□□ 1.24
LINC01550-201ENST00000499006 ZNF543Q08ER8 600 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 RTN1Q16799 776 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 NECAB1Q8N987 351 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 RAD21O60216 631 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 PARP1P09874 1014 aaKnown RBP22.79■■□□□ 1.24
LINC01550-201ENST00000499006 SLC1A4P43007 532 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 MOGSQ13724 837 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 ASPRV1Q53RT3 343 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 STAG2Q8N3U4 1231 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 CTCFLQ8NI51 663 aaPredicted RBP22.79■■□□□ 1.24
LINC01550-201ENST00000499006 CHMP4CQ96CF2 233 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 MS4A4AQ96JQ5 239 aa22.79■■□□□ 1.24
LINC01550-201ENST00000499006 NCOA5Q9HCD5 579 aaKnown RBP22.79■■□□□ 1.24
LINC01550-201ENST00000499006 FAM155AB1AL88 458 aaPredicted RBP22.78■■□□□ 1.24
LINC01550-201ENST00000499006 WDR46O15213 610 aaKnown RBP22.78■■□□□ 1.24
LINC01550-201ENST00000499006 SLC10A3P09131 477 aa22.78■■□□□ 1.24
LINC01550-201ENST00000499006 VCAM1P19320 739 aa22.78■■□□□ 1.24
LINC01550-201ENST00000499006 KIF5BP33176 963 aa22.78■■□□□ 1.24
LINC01550-201ENST00000499006 ADD1P35611 737 aaKnown RBP22.78■■□□□ 1.24
LINC01550-201ENST00000499006 ANP32AP39687 249 aaKnown RBP22.78■■□□□ 1.24
LINC01550-201ENST00000499006 SNAPC2Q13487 334 aa22.78■■□□□ 1.24
LINC01550-201ENST00000499006 PROCA1Q8NCQ7 364 aaPredicted RBP22.78■■□□□ 1.24
LINC01550-201ENST00000499006 NUP88Q99567 741 aaPredicted RBP22.78■■□□□ 1.24
LINC01550-201ENST00000499006 RBM28Q9NW13 759 aaKnown RBP22.78■■□□□ 1.24
LINC01550-201ENST00000499006 GOLGA8HP0CJ92 632 aa22.77■■□□□ 1.24
LINC01550-201ENST00000499006 BMP3P12645 472 aa22.77■■□□□ 1.24
LINC01550-201ENST00000499006 CUL4AQ13619 759 aa22.77■■□□□ 1.24
LINC01550-201ENST00000499006 GPATCH4Q5T3I0 446 aaKnown RBP22.77■■□□□ 1.24
LINC01550-201ENST00000499006 KCTD1Q719H9 257 aa22.77■■□□□ 1.24
LINC01550-201ENST00000499006 TMOD4Q9NZQ9 345 aa22.77■■□□□ 1.24
LINC01550-201ENST00000499006 COL11A1P12107 1806 aaPredicted RBP22.77■■□□□ 1.24
LINC01550-201ENST00000499006 FRMPD2Q68DX3 1309 aaPredicted RBP22.77■■□□□ 1.24
LINC01550-201ENST00000499006 CCDC196A0A1B0GTZ2 297 aa22.76■■□□□ 1.23
LINC01550-201ENST00000499006 RASSF10A6NK89 507 aa22.76■■□□□ 1.23
LINC01550-201ENST00000499006 GTF2A2P52657 109 aa22.76■■□□□ 1.23
LINC01550-201ENST00000499006 NTRK3Q16288 839 aa22.76■■□□□ 1.23
LINC01550-201ENST00000499006 FAM83BQ5T0W9 1011 aa22.76■■□□□ 1.23
LINC01550-201ENST00000499006 CCDC102AQ96A19 550 aa22.76■■□□□ 1.23
LINC01550-201ENST00000499006 PLA2G6O60733 806 aa22.75■■□□□ 1.23
LINC01550-201ENST00000499006 MKRN3Q13064 507 aaKnown RBP22.75■■□□□ 1.23
LINC01550-201ENST00000499006 CCDC96Q2M329 555 aa22.75■■□□□ 1.23
LINC01550-201ENST00000499006 TMTC3Q6ZXV5 915 aa22.75■■□□□ 1.23
LINC01550-201ENST00000499006 CCDC83Q8IWF9 413 aa22.75■■□□□ 1.23
LINC01550-201ENST00000499006 KLRF2D3W0D1 207 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 PLEKHA8P1O95397 391 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 GNAQP50148 359 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 FUT2Q10981 343 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 BECN1Q14457 450 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 TTBK2Q6IQ55 1244 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 BTNL9Q6UXG8 535 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 FASTKD5Q7L8L6 764 aaKnown RBP22.74■■□□□ 1.23
LINC01550-201ENST00000499006 NBPF11Q86T75 865 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 SRBD1Q8N5C6 995 aaKnown RBP22.74■■□□□ 1.23
LINC01550-201ENST00000499006 RPAP3Q9H6T3 665 aaPredicted RBP22.74■■□□□ 1.23
LINC01550-201ENST00000499006 GPCPD1Q9NPB8 672 aa22.74■■□□□ 1.23
LINC01550-201ENST00000499006 DHX16O60231 1041 aaKnown RBP22.73■■□□□ 1.23
LINC01550-201ENST00000499006 CTDNEP1O95476 244 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 CETPP11597 493 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 SMARCA1P28370 1054 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 SLC35G1Q2M3R5 365 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 TREML2Q5T2D2 321 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 LZTS2Q9BRK4 669 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 TESPA1A2RU30 521 aaPredicted RBP22.73■■□□□ 1.23
LINC01550-201ENST00000499006 TMEM232C9JQI7 657 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 DEFB115Q30KQ5 88 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 GPAT2Q6NUI2 795 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 GADL1Q6ZQY3 521 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 CMTR1Q8N1G2 835 aaKnown RBP22.73■■□□□ 1.23
LINC01550-201ENST00000499006 CPVLQ9H3G5 476 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 AGTPBP1Q9UPW5 1226 aa22.73■■□□□ 1.23
LINC01550-201ENST00000499006 SMCHD1A6NHR9 2005 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 CYTH3O43739 400 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 IFNAR1P17181 557 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 HOXA7P31268 230 aaPredicted RBP22.72■■□□□ 1.23
LINC01550-201ENST00000499006 STAT2P52630 851 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 CATSPERGQ6ZRH7 1159 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 BRI3BPQ8WY22 251 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 SPZ1Q9BXG8 430 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 UBA5Q9GZZ9 404 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 RIOX1Q9H6W3 641 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 FEM1BQ9UK73 627 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 CNTNAP5Q8WYK1 1306 aa22.72■■□□□ 1.23
LINC01550-201ENST00000499006 A0A0G2JMZ2 1700 aa22.71■■□□□ 1.23
LINC01550-201ENST00000499006 CCL15-CCL14A0A0B4J2E2 113 aa22.71■■□□□ 1.23
LINC01550-201ENST00000499006 CPLX1O14810 134 aa22.71■■□□□ 1.23
LINC01550-201ENST00000499006 SLC16A2P36021 539 aa22.71■■□□□ 1.23
LINC01550-201ENST00000499006 CCL15Q16663 113 aa22.71■■□□□ 1.23
LINC01550-201ENST00000499006 CYP4F22Q6NT55 531 aa22.71■■□□□ 1.23
LINC01550-201ENST00000499006 NSUN7Q8NE18 718 aaKnown RBP22.71■■□□□ 1.23
LINC01550-201ENST00000499006 CHURC1Q8WUH1 139 aa22.71■■□□□ 1.23
LINC01550-201ENST00000499006 LLPHQ9BRT6 129 aaKnown RBP22.71■■□□□ 1.23
LINC01550-201ENST00000499006 MANSC4A6NHS7 340 aaPredicted RBP22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L15C9J2P7 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L13C9JLJ4 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L11C9JVI0 530 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms