RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 FAM83BQ5T0W9 1011 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 APPBP2Q92624 585 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 GDF15Q99988 308 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 MROH8Q9H579 483 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 MKNK2Q9HBH9 465 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 SLC5A4Q9NY91 659 aa13.22□□□□□ -0.29
LSAMP-206ENST00000498645 GSG1L2A8MUP6 293 aa13.21□□□□□ -0.29
LSAMP-206ENST00000498645 M0R2C6 588 aa13.21□□□□□ -0.29
LSAMP-206ENST00000498645 GPAA1O43292 621 aa13.21□□□□□ -0.29
LSAMP-206ENST00000498645 FCER1AP12319 257 aa13.21□□□□□ -0.29
LSAMP-206ENST00000498645 ATN1P54259 1190 aaPredicted RBP13.21□□□□□ -0.29
LSAMP-206ENST00000498645 OLFML2BQ68BL8 750 aa13.21□□□□□ -0.29
LSAMP-206ENST00000498645 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.29
LSAMP-206ENST00000498645 UBE2OQ9C0C9 1292 aaKnown RBP13.21□□□□□ -0.29
LSAMP-206ENST00000498645 PRDM1O75626 825 aa13.2□□□□□ -0.3
LSAMP-206ENST00000498645 ZFYP08048 801 aaPredicted RBP13.2□□□□□ -0.3
LSAMP-206ENST00000498645 RASA1P20936 1047 aa13.2□□□□□ -0.3
LSAMP-206ENST00000498645 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
LSAMP-206ENST00000498645 MDM2Q00987 491 aaPredicted RBP13.2□□□□□ -0.3
LSAMP-206ENST00000498645 PRAMEF19Q5SWL8 479 aa13.2□□□□□ -0.3
LSAMP-206ENST00000498645 GJC2Q5T442 439 aaPredicted RBP13.2□□□□□ -0.3
LSAMP-206ENST00000498645 MMP19Q99542 508 aa13.2□□□□□ -0.3
LSAMP-206ENST00000498645 PPP1R9AQ9ULJ8 1098 aa13.2□□□□□ -0.3
LSAMP-206ENST00000498645 DNM1LO00429 736 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 VWA5AO00534 786 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 SLC25A27O95847 323 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 PGK2P07205 417 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 BMP8BP34820 402 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 KCTD2Q14681 263 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 ABRAQ8N0Z2 381 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
LSAMP-206ENST00000498645 MAML3Q96JK9 1138 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 FSD1Q9BTV5 496 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
LSAMP-206ENST00000498645 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
LSAMP-206ENST00000498645 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 ROBO3Q96MS0 1386 aa13.19□□□□□ -0.3
LSAMP-206ENST00000498645 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 ERC2O15083 957 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 SEPT4O43236 478 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 GNAT2P19087 354 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 STAT3P40763 770 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 LRRFIP1Q32MZ4 808 aaKnown RBP13.18□□□□□ -0.3
LSAMP-206ENST00000498645 GIMAP6Q6P9H5 292 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 TDHQ8IZJ6 230 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
LSAMP-206ENST00000498645 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
LSAMP-206ENST00000498645 SLF1Q9BQI6 1058 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
LSAMP-206ENST00000498645 ISY1Q9ULR0 285 aaKnown RBP13.18□□□□□ -0.3
LSAMP-206ENST00000498645 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 NDUFB10O96000 172 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 IGHA2P01877 340 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 RTP1P59025 263 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
LSAMP-206ENST00000498645 ARRDC4Q8NCT1 418 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 ZNF287Q9HBT7 754 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 ZNF214Q9UL59 606 aaPredicted RBP13.17□□□□□ -0.3
LSAMP-206ENST00000498645 ADAMTS5Q9UNA0 930 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 ATP11BQ9Y2G3 1177 aa13.17□□□□□ -0.3
LSAMP-206ENST00000498645 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
LSAMP-206ENST00000498645 LAMA2P24043 3122 aaKnown RBP13.16□□□□□ -0.3
LSAMP-206ENST00000498645 F5H6K3 240 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 MX1P20591 662 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 KLRC3Q07444 240 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 IFNL3Q8IZI9 196 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
LSAMP-206ENST00000498645 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
LSAMP-206ENST00000498645 PRDM5Q9NQX1 630 aaPredicted RBP13.16□□□□□ -0.3
LSAMP-206ENST00000498645 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
LSAMP-206ENST00000498645 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
LSAMP-206ENST00000498645 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
LSAMP-206ENST00000498645 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
LSAMP-206ENST00000498645 COPB2P35606 906 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 ADCYAP1R1P41586 468 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.3
LSAMP-206ENST00000498645 PDE4BQ07343 736 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 LRRC41Q15345 812 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 REPS2Q8NFH8 660 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 TEX13BQ9BXU2 312 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 NAPBQ9H115 298 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms