RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 PHOX2BQ99453 314 aa11.09□□□□□ -0.63
FAM3D-205ENST00000498347 LMCD1Q9NZU5 365 aa11.09□□□□□ -0.63
FAM3D-205ENST00000498347 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
FAM3D-205ENST00000498347 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
FAM3D-205ENST00000498347 ATAD5Q96QE3 1844 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 A0A0U1RQG5 324 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 GH2P01242 217 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 VCAM1P19320 739 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 RFX5P48382 616 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 RASGRF1Q13972 1273 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 MB21D1Q8N884 522 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 ARNTL2Q8WYA1 636 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 NSUN4Q96CB9 384 aaKnown RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 NOL10Q9BSC4 688 aaKnown RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 DIS3Q9Y2L1 958 aaKnown RBP11.08□□□□□ -0.64
FAM3D-205ENST00000498347 CHD7Q9P2D1 2997 aa11.08□□□□□ -0.64
FAM3D-205ENST00000498347 LRRC37A2A6NM11 1700 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 BRWD1Q9NSI6 2320 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 ZBBXA8MT70 800 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 CIAO1O76071 339 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 BAG3O95817 575 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 CD4P01730 458 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 CA3P07451 260 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 CCDC27Q2M243 656 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 LEXMQ3ZCV2 418 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 WWC1Q8IX03 1113 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 SH3RF3Q8TEJ3 882 aaPredicted RBP11.07□□□□□ -0.64
FAM3D-205ENST00000498347 HIPK3Q9H422 1215 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 SPC25Q9HBM1 224 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 PALD1Q9ULE6 856 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 CNPY2Q9Y2B0 182 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 IL16Q14005 1332 aa11.07□□□□□ -0.64
FAM3D-205ENST00000498347 REV3LO60673 3130 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 DUSP11O75319 330 aaKnown RBP11.06□□□□□ -0.64
FAM3D-205ENST00000498347 ASGR1P07306 291 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 PLCG2P16885 1265 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 CST5P28325 142 aaPredicted RBP11.06□□□□□ -0.64
FAM3D-205ENST00000498347 PTPN5P54829 565 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 GRB10Q13322 594 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 PLS1Q14651 629 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
FAM3D-205ENST00000498347 HFE2Q6ZVN8 426 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.06□□□□□ -0.64
FAM3D-205ENST00000498347 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 PRRX2Q99811 253 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
FAM3D-205ENST00000498347 ZFHX2Q9C0A1 2572 aaPredicted RBP11.06□□□□□ -0.64
FAM3D-205ENST00000498347 SYNRGQ9UMZ2 1314 aa11.06□□□□□ -0.64
FAM3D-205ENST00000498347 SLC25A27O95847 323 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 HLA-DOAP06340 250 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 ADORA1P30542 326 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 CCL23P55773 120 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 PPP4CP60510 307 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 TIMM10P62072 90 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 TAP1Q03518 808 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 TATDN1Q6P1N9 297 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
FAM3D-205ENST00000498347 MAPKAPK5Q8IW41 473 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 ACER1Q8TDN7 264 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 CDCA7LQ96GN5 454 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 UBE2ZQ9H832 354 aaPredicted RBP11.05□□□□□ -0.64
FAM3D-205ENST00000498347 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
FAM3D-205ENST00000498347 TRANK1O15050 2925 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 ZNF318Q5VUA4 2279 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 GRXCR2A6NFK2 248 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 GFRA3O60609 400 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 C6orf222P0C671 652 aaPredicted RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 ANP32AP39687 249 aaKnown RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 EXOSC9Q06265 439 aaKnown RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 ZNF792Q3KQV3 632 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 PTCRAQ6ISU1 281 aaPredicted RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 ERMP1Q7Z2K6 904 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 MSL3Q8N5Y2 521 aaKnown RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 LENG1Q96BZ8 264 aaPredicted RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 MMP19Q99542 508 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 UPF3BQ9BZI7 483 aaKnown RBP11.04□□□□□ -0.64
FAM3D-205ENST00000498347 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 SIL1Q9H173 461 aa11.04□□□□□ -0.64
FAM3D-205ENST00000498347 GBF1Q92538 1859 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms