RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 CDH24Q86UP0 819 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 KCT2Q8NC54 265 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 C2CD4AQ8NCU7 369 aaPredicted RBP5.11□□□□□ -1.59
CALD1-224ENST00000498254 SMG8Q8ND04 991 aaKnown RBP5.11□□□□□ -1.59
CALD1-224ENST00000498254 DCAF11Q8TEB1 546 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 SGSM3Q96HU1 749 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 FMNL2Q96PY5 1086 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 DHRS4Q9BTZ2 278 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 FOXQ1Q9C009 403 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 KLHL25Q9H0H3 589 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 GBP3Q9H0R5 595 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 NCOA5Q9HCD5 579 aaKnown RBP5.11□□□□□ -1.59
CALD1-224ENST00000498254 DDX56Q9NY93 547 aaKnown RBP5.11□□□□□ -1.59
CALD1-224ENST00000498254 MRPS23Q9Y3D9 190 aaKnown RBP5.11□□□□□ -1.59
CALD1-224ENST00000498254 SYNGAP1Q96PV0 1343 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 MEGF11A6BM72 1044 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 GAS2O43903 313 aaKnown RBP5.1□□□□□ -1.59
CALD1-224ENST00000498254 TIAF1O95411 115 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 PREPP48147 710 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 TRIM28Q13263 835 aaKnown RBP5.1□□□□□ -1.59
CALD1-224ENST00000498254 FAM50AQ14320 339 aaKnown RBP5.1□□□□□ -1.59
CALD1-224ENST00000498254 HSP90AA2PQ14568 343 aaPredicted RBP5.1□□□□□ -1.59
CALD1-224ENST00000498254 PPP2R5DQ14738 602 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 GRIK4Q16099 956 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 PLEKHG6Q3KR16 790 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 TM4SF20Q53R12 229 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 CT47A1Q5JQC4 288 aaPredicted RBP5.1□□□□□ -1.59
CALD1-224ENST00000498254 CNNM4Q6P4Q7 775 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 NOL8Q76FK4 1167 aaKnown RBP5.1□□□□□ -1.59
CALD1-224ENST00000498254 JAMLQ86YT9 394 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 SYNPOQ8N3V7 929 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 RIN3Q8TB24 985 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 PPP1R13LQ8WUF5 828 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 CHAC2Q8WUX2 184 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 STAG1Q8WVM7 1258 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 NINJ1Q92982 152 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 BRF1Q92994 677 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 CLUHP3Q96NS8 147 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.1□□□□□ -1.59
CALD1-224ENST00000498254 MRPL18Q9H0U6 180 aaKnown RBP5.1□□□□□ -1.59
CALD1-224ENST00000498254 SUGCTQ9HAC7 445 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 FBXL21Q9UKT6 434 aa5.1□□□□□ -1.59
CALD1-224ENST00000498254 BLACEA4D250 179 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 SART1O43290 800 aaKnown RBP5.09□□□□□ -1.59
CALD1-224ENST00000498254 PDE8AO60658 829 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 PPM1BO75688 479 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 LRIG2O94898 1065 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 GLB1P16278 677 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 USP11P51784 963 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 ZNF143P52747 638 aaPredicted RBP5.09□□□□□ -1.59
CALD1-224ENST00000498254 LONRF2Q1L5Z9 754 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 NBPF12Q5TAG4 269 aaPredicted RBP5.09□□□□□ -1.59
CALD1-224ENST00000498254 LETMD1Q6P1Q0 360 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 THNSL2Q86YJ6 484 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 BTN2A2Q8WVV5 523 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 SMARCC1Q92922 1105 aaPredicted RBP5.09□□□□□ -1.59
CALD1-224ENST00000498254 KISS1RQ969F8 398 aaPredicted RBP5.09□□□□□ -1.59
CALD1-224ENST00000498254 KREMEN1Q96MU8 473 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 NACC1Q96RE7 527 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 IER2Q9BTL4 223 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 PCOLCE2Q9UKZ9 415 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 AKT3Q9Y243 479 aa5.09□□□□□ -1.59
CALD1-224ENST00000498254 F8W735 103 aaPredicted RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 NOP56O00567 594 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 SHOXO15266 292 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 KCNH1O95259 989 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 S100BP04271 92 aaPredicted RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 NFICP08651 508 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 PABPC1P11940 636 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 ITGA4P13612 1032 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 SDSP20132 328 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 CD247P20963 164 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 CDKN1CP49918 316 aaPredicted RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 SNW1Q13573 536 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 AUHQ13825 339 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 SF1Q15637 639 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 ANKRD34AQ69YU3 496 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 CDPF1Q6NVV7 123 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 IGF2-ASQ6U949 168 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 NSMFQ6X4W1 530 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 C7orf61Q8IZ16 206 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 ZNF513Q8N8E2 541 aaPredicted RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 PRPF38AQ8NAV1 312 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 BVESQ8NE79 360 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 DNAJB8Q8NHS0 232 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 FBLIM1Q8WUP2 373 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 TARS2Q9BW92 718 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 NOL6Q9H6R4 1146 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 METTL14Q9HCE5 456 aaKnown RBP5.08□□□□□ -1.6
CALD1-224ENST00000498254 GP6Q9HCN6 339 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 NDOR1Q9UHB4 597 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 USP21Q9UK80 565 aa5.08□□□□□ -1.6
CALD1-224ENST00000498254 A0A087X0B3 334 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 MEIS1O00470 390 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 PLD2O14939 933 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 DYNC1LI2O43237 492 aaPredicted RBP5.07□□□□□ -1.6
CALD1-224ENST00000498254 LRRN2O75325 713 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 SLITRK5O94991 958 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 PARNO95453 639 aaKnown RBP5.07□□□□□ -1.6
CALD1-224ENST00000498254 VIL1P09327 827 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms