RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RAB19A4D1S5 217 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 TTLL8A6PVC2 850 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CYP26A1O43174 497 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 TSPAN8P19075 237 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 USP11P51784 963 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CACNA2D1P54289 1103 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 NCKAP1LP55160 1127 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 KRT83P78385 493 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PRPF4BQ13523 1007 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 BTG3Q14201 252 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 PLA2G4EQ3MJ16 856 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 TOR1AIP1Q5JTV8 583 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CDCA2Q69YH5 1023 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 SERPINA13PQ6UXR4 307 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 RELL1Q8IUW5 271 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 FUKQ8N0W3 1084 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 DNAJC22Q8N4W6 341 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 TPCN2Q8NHX9 752 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CPLX3Q8WVH0 158 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 MAML1Q92585 1016 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ZNF775Q96BV0 537 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 THAP11Q96EK4 314 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 MOCOSQ96EN8 888 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ZNF514Q96K75 400 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 FBXL18Q96ME1 805 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 DGCR6LQ9BY27 220 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 VRTNQ9H8Y1 702 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 DKK3Q9UBP4 350 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 FKBPLQ9UIM3 349 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 MIA2Q96PC5 1412 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 H3BM21 787 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 MSTNO14793 375 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 SRGAP3O43295 1099 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ABCG1P45844 678 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PPP2R5DQ14738 602 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 FAM117BQ6P1L5 589 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PAOXQ6QHF9 649 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 FAM160A2Q8N612 972 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 DDX54Q8TDD1 881 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 ANKRD24Q8TF21 1146 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PURBQ96QR8 312 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 PKD2L1Q9P0L9 805 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 TMEM9Q9P0T7 183 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 IGF1RP08069 1367 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ATRNL1Q5VV63 1379 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 F5H697 171 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CAPN9O14815 690 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 TRIM66O15016 1216 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 FYB1O15117 783 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 WDPCPO95876 746 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 GNRH1P01148 92 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 RPLP1P05386 114 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 ADH1AP07327 375 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CALRP27797 417 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 RNF144AP50876 292 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 TNFAIP2Q03169 654 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 LAMC2Q13753 1193 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 SMC1AQ14683 1233 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 NFKBIBQ15653 356 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 DUOXA1Q1HG43 343 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 HEATR3Q7Z4Q2 680 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MIGA1Q8NAN2 632 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 SLC4A11Q8NBS3 891 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 GIMAP8Q8ND71 665 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 RAB33BQ9H082 229 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PDGFCQ9NRA1 345 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CEP72Q9P209 647 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 GMPR2Q9P2T1 348 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 RPS6KA6Q9UK32 745 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 RALYQ9UKM9 306 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 EID1Q9Y6B2 187 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PAPPAQ13219 1627 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZMYND10O75800 440 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CBX6O95503 412 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 AMHP03971 560 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 BCRP11274 1271 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 NTF4P34130 210 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 HMGCLP35914 325 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ARL4DP49703 201 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 RAB9AP51151 201 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ERVFC1-1P60608 527 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 NR1H3Q13133 447 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 TRIM28Q13263 835 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 GRAPQ13588 217 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 BYSLQ13895 437 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 ACAP2Q15057 778 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 FAM110CQ1W6H9 321 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 EML3Q32P44 896 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MEI1Q5TIA1 1274 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ERICH6BQ5W0A0 696 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 DTX2Q86UW9 622 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CDKL3Q8IVW4 592 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 CCDC155Q8N6L0 562 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PAF1Q8N7H5 531 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MTMR14Q8NCE2 650 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 SPAG5Q96R06 1193 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 UHRF1Q96T88 793 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.7□□□□□ -2.14
XRN1-214ENST00000498077 CCDC68Q9H2F9 335 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PLEKHA4Q9H4M7 779 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms