RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 PDGFRBP09619 1106 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 TMPOP42166 694 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 PCBP4P57723 403 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 LMOD3Q0VAK6 560 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 TAF7Q15545 349 aaPredicted RBP7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 ARSHQ5FYA8 562 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 ATCAYQ86WG3 371 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 TTC5Q8N0Z6 440 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 RTF1Q92541 710 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 EDEM1Q92611 657 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 TNFRSF25Q93038 417 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 BHMTQ93088 406 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 DNAJC25Q9H1X3 360 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 NARFQ9UHQ1 456 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 KLF15Q9UIH9 416 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 POLIQ9UNA4 740 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 ZBTB1Q9Y2K1 713 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 ADCY9O60503 1353 aa7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 IBTKQ9P2D0 1353 aaPredicted RBP7.44□□□□□ -1.22
TMEM39A-212ENST00000497993 BTBD11A6QL63 1104 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 ADARB2-AS1A8MUL3 147 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 STARD3NLO95772 234 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 PDGFAP04085 211 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 NEFMP07197 916 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 TM4SF1P30408 202 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 ST13P50502 369 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 DNM1Q05193 864 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 TAF1CQ15572 869 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 SVOPQ8N4V2 548 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 GALNT6Q8NCL4 622 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 TTC16Q8NEE8 873 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 WHAMMQ8TF30 809 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 EDARADDQ8WWZ3 215 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 JDP2Q8WYK2 163 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 PMM1Q92871 262 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 RUNDC1Q96C34 613 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 CEP89Q96ST8 783 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 UBA5Q9GZZ9 404 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 GABBR1Q9UBS5 961 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 MAPK8IP3Q9UPT6 1336 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 TIAM2Q8IVF5 1701 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 ATP10DQ9P241 1426 aa7.43□□□□□ -1.22
TMEM39A-212ENST00000497993 TNRC6CQ9HCJ0 1690 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 DDX60Q8IY21 1712 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 A0A087WZG4 1122 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 SASH3O75995 380 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 MMP10P09238 476 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 HOXB7P09629 217 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 SNRPA1P09661 255 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 EPXP11678 715 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 NFKB1P19838 968 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 TARSP26639 723 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 RFC4P35249 363 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 TGFB2P61812 414 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 TRIP4Q15650 581 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 PCSK7Q16549 785 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 PDE12Q6L8Q7 609 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 XKR5Q6UX68 686 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 MCM10Q7L590 875 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 RAB44Q7Z6P3 723 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 FMNL3Q8IVF7 1028 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 STAG1Q8WVM7 1258 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 APPBP2Q92624 585 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 DEPDC7Q96QD5 511 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 C12orf49Q9H741 205 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 ZNF408Q9H9D4 720 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 SNTG2Q9NY99 539 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 STRIP2Q9ULQ0 834 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 SLX4Q8IY92 1834 aa7.42□□□□□ -1.22
TMEM39A-212ENST00000497993 LRRC37AA6NMS7 1700 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ELOA3DA6NLF2 546 aaPredicted RBP7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 POLRMTO00411 1230 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 CHL1O00533 1208 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 EIF1AYO14602 144 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 KCNQ3O43525 872 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 PRC1O43663 620 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 CREB3O43889 395 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ARHGEF15O94989 841 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ZNF853P0CG23 659 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 RARAP10276 462 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ALAS2P22557 587 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 TBX4P57082 545 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 EIF4A1P60842 406 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 AMPD3Q01432 767 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 DDR1Q08345 913 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ELOA3BQ3SY89 546 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 CCDC184Q52MB2 194 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 CLEC4GQ6UXB4 293 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 C1orf229Q6ZS94 237 aaPredicted RBP7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ANKS3Q6ZW76 656 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ERMP1Q7Z2K6 904 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 NLGN2Q8NFZ4 835 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ELOA3Q8NG57 546 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 MDFIQ99750 246 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 ZFATQ9P243 1243 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms