RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 DDX60LQ5H9U9 1706 aaKnown RBP12.23□□□□□ -0.45
PTPRN-218ENST00000497977 IGKV6D-41A0A0C4DH26 115 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 PLA2G6O60733 806 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-218ENST00000497977 TOP1P11387 765 aaKnown RBP12.23□□□□□ -0.45
PTPRN-218ENST00000497977 STAT3P40763 770 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 RGS19P49795 217 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 MLLT1Q03111 559 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-218ENST00000497977 EVX2Q03828 476 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 PRKCZQ05513 592 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 Q3C1V9 767 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 SAMD1Q6SPF0 538 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-218ENST00000497977 ABRAQ8N0Z2 381 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 SLF1Q9BQI6 1058 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 UBAC1Q9BSL1 405 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPRN-218ENST00000497977 ARHGAP39Q9C0H5 1083 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 SPATC1LQ9H0A9 340 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 PPP1R9AQ9ULJ8 1098 aa12.23□□□□□ -0.45
PTPRN-218ENST00000497977 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPRN-218ENST00000497977 BAZ2AQ9UIF9 1905 aaKnown RBP12.22□□□□□ -0.45
PTPRN-218ENST00000497977 SPDYE16A6NNV3 312 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-218ENST00000497977 NDUFB10O96000 172 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 FCER1AP12319 257 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 STAT2P52630 851 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 OAZ1P54368 228 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 HAND2P61296 217 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 KCTD2Q14681 263 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 GPR142Q7Z601 462 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
PTPRN-218ENST00000497977 NCAPG2Q86XI2 1143 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 DCAF4Q8WV16 495 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
PTPRN-218ENST00000497977 VWA5AO00534 786 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 SGSM2O43147 1006 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 PTPREP23469 700 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 MCCP23508 829 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 TMTC2Q8N394 836 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 ZNF333Q96JL9 665 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 RNF208Q9H0X6 261 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 KAT14Q9H8E8 782 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 HMX1Q9NP08 348 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-218ENST00000497977 ADAMTS5Q9UNA0 930 aa12.21□□□□□ -0.45
PTPRN-218ENST00000497977 MYH1P12882 1939 aa12.21□□□□□ -0.46
PTPRN-218ENST00000497977 PLIN4Q96Q06 1357 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 FOXP2O15409 715 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 ZKSCAN1P17029 563 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-218ENST00000497977 CYP2B6P20813 491 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 TRAF1Q13077 416 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 MAP2K5Q13163 448 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
PTPRN-218ENST00000497977 RIOX2Q8IUF8 465 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 NCOA7Q8NI08 942 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 SH3TC2Q8TF17 1288 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 MAP4K1Q92918 833 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 DDX11Q96FC9 970 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 ZSCAN10Q96SZ4 725 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-218ENST00000497977 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 GJD2Q9UKL4 321 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 GABRQQ9UN88 632 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 LAMA4Q16363 1823 aa12.2□□□□□ -0.46
PTPRN-218ENST00000497977 RPTORQ8N122 1335 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 ATP2A1O14983 1001 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 KDM4AO75164 1064 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 CDC45O75419 566 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 HMGCRP04035 888 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 ERCC3P19447 782 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 NOVP48745 357 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 TKFCQ3LXA3 575 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 ATG4CQ96DT6 458 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 TMEM47Q9BQJ4 181 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 MOV10L1Q9BXT6 1211 aaKnown RBP12.19□□□□□ -0.46
PTPRN-218ENST00000497977 IL17RBQ9NRM6 502 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 BTBD7Q9P203 1132 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 ZSWIM5Q9P217 1185 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
PTPRN-218ENST00000497977 MYH8P13535 1937 aa12.19□□□□□ -0.46
PTPRN-218ENST00000497977 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
PTPRN-218ENST00000497977 GJB1P08034 283 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 HOXC6P09630 235 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 CTGFP29279 349 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 TMEM132BQ14DG7 1078 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 MORN1Q5T089 497 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 IFIT1BQ5T764 474 aaKnown RBP12.18□□□□□ -0.46
PTPRN-218ENST00000497977 CLEC10AQ8IUN9 316 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 LRRC47Q8N1G4 583 aaKnown RBP12.18□□□□□ -0.46
PTPRN-218ENST00000497977 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 ANKS1AQ92625 1134 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 MMP19Q99542 508 aa12.18□□□□□ -0.46
PTPRN-218ENST00000497977 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms