RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 PRDM5Q9NQX1 630 aaPredicted RBP26.25■■□□□ 1.79
CLIC4-204ENST00000497755 PARP14Q460N5 1801 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 CDH23Q9H251 3354 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 TRIM43BA6NCK2 446 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 WDR46O15213 610 aaKnown RBP26.24■■□□□ 1.79
CLIC4-204ENST00000497755 FAM47AQ5JRC9 791 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 C1orf53Q5VUE5 145 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 SAMD1Q6SPF0 538 aaPredicted RBP26.24■■□□□ 1.79
CLIC4-204ENST00000497755 SH3RF1Q7Z6J0 888 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.24■■□□□ 1.79
CLIC4-204ENST00000497755 TRIM43Q96BQ3 446 aaPredicted RBP26.24■■□□□ 1.79
CLIC4-204ENST00000497755 COL25A1Q9BXS0 654 aaPredicted RBP26.24■■□□□ 1.79
CLIC4-204ENST00000497755 BCL11AQ9H165 835 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 BOLA2Q9H3K6 86 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 PAG1Q9NWQ8 432 aa26.24■■□□□ 1.79
CLIC4-204ENST00000497755 USP17L12C9JPN9 530 aa26.23■■□□□ 1.79
CLIC4-204ENST00000497755 USP17L21D6R901 530 aa26.23■■□□□ 1.79
CLIC4-204ENST00000497755 SLC25A27O95847 323 aa26.23■■□□□ 1.79
CLIC4-204ENST00000497755 CHGBP05060 677 aa26.23■■□□□ 1.79
CLIC4-204ENST00000497755 ZNF697Q5TEC3 545 aa26.23■■□□□ 1.79
CLIC4-204ENST00000497755 PDLIM7Q9NR12 457 aa26.23■■□□□ 1.79
CLIC4-204ENST00000497755 PRUNE2Q8WUY3 3088 aa26.23■■□□□ 1.79
CLIC4-204ENST00000497755 EEF2P13639 858 aaKnown RBP26.22■■□□□ 1.79
CLIC4-204ENST00000497755 C16orf86Q6ZW13 317 aa26.22■■□□□ 1.79
CLIC4-204ENST00000497755 FBXO28Q9NVF7 368 aa26.22■■□□□ 1.79
CLIC4-204ENST00000497755 COL11A1P12107 1806 aaPredicted RBP26.21■■□□□ 1.79
CLIC4-204ENST00000497755 RAB11FIP3O75154 756 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 PGK2P07205 417 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 ATP5JP18859 108 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 RIOX2Q8IUF8 465 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 MMP19Q99542 508 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 SEMA6BQ9H3T3 888 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 NRBP1Q9UHY1 535 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 PHF24Q9UPV7 400 aa26.21■■□□□ 1.79
CLIC4-204ENST00000497755 TLE2Q04725 743 aa26.2■■□□□ 1.78
CLIC4-204ENST00000497755 ZNF792Q3KQV3 632 aa26.2■■□□□ 1.78
CLIC4-204ENST00000497755 CDX2Q99626 313 aaPredicted RBP26.2■■□□□ 1.78
CLIC4-204ENST00000497755 HAUS7Q99871 368 aa26.2■■□□□ 1.78
CLIC4-204ENST00000497755 KANSL2Q9H9L4 492 aa26.2■■□□□ 1.78
CLIC4-204ENST00000497755 XPNPEP3Q9NQH7 507 aa26.2■■□□□ 1.78
CLIC4-204ENST00000497755 ZBTB40Q9NUA8 1239 aa26.2■■□□□ 1.78
CLIC4-204ENST00000497755 VWA5AO00534 786 aa26.19■■□□□ 1.78
CLIC4-204ENST00000497755 HMMRO75330 724 aa26.19■■□□□ 1.78
CLIC4-204ENST00000497755 TAL1P17542 331 aaPredicted RBP26.19■■□□□ 1.78
CLIC4-204ENST00000497755 STAT3P40763 770 aa26.19■■□□□ 1.78
CLIC4-204ENST00000497755 UBE3CQ15386 1083 aa26.19■■□□□ 1.78
CLIC4-204ENST00000497755 TINF2Q9BSI4 451 aa26.19■■□□□ 1.78
CLIC4-204ENST00000497755 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.19■■□□□ 1.78
CLIC4-204ENST00000497755 DIS3Q9Y2L1 958 aaKnown RBP26.19■■□□□ 1.78
CLIC4-204ENST00000497755 RARBP10826 455 aa26.18■■□□□ 1.78
CLIC4-204ENST00000497755 ITGB8P26012 769 aa26.18■■□□□ 1.78
CLIC4-204ENST00000497755 CTR9Q6PD62 1173 aa26.18■■□□□ 1.78
CLIC4-204ENST00000497755 ZNF214Q9UL59 606 aaPredicted RBP26.18■■□□□ 1.78
CLIC4-204ENST00000497755 PPP1R9AQ9ULJ8 1098 aa26.18■■□□□ 1.78
CLIC4-204ENST00000497755 PGK1P00558 417 aa26.17■■□□□ 1.78
CLIC4-204ENST00000497755 MS4A1P11836 297 aa26.17■■□□□ 1.78
CLIC4-204ENST00000497755 SMAD3P84022 425 aaKnown RBP26.17■■□□□ 1.78
CLIC4-204ENST00000497755 KCTD2Q14681 263 aa26.17■■□□□ 1.78
CLIC4-204ENST00000497755 AMOTL1Q8IY63 956 aa26.17■■□□□ 1.78
CLIC4-204ENST00000497755 REPS2Q8NFH8 660 aa26.17■■□□□ 1.78
CLIC4-204ENST00000497755 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.17■■□□□ 1.78
CLIC4-204ENST00000497755 TACC3Q9Y6A5 838 aa26.17■■□□□ 1.78
CLIC4-204ENST00000497755 SLC4A4Q9Y6R1 1079 aa26.17■■□□□ 1.78
CLIC4-204ENST00000497755 ZBED9Q6R2W3 1325 aa26.16■■□□□ 1.78
CLIC4-204ENST00000497755 ZNF865P0CJ78 1059 aaPredicted RBP26.16■■□□□ 1.78
CLIC4-204ENST00000497755 RNF180Q86T96 592 aa26.16■■□□□ 1.78
CLIC4-204ENST00000497755 GOPCQ9HD26 462 aa26.16■■□□□ 1.78
CLIC4-204ENST00000497755 COG6Q9Y2V7 657 aa26.16■■□□□ 1.78
CLIC4-204ENST00000497755 PLXNA1Q9UIW2 1896 aa26.16■■□□□ 1.78
CLIC4-204ENST00000497755 FAM83BQ5T0W9 1011 aa26.15■■□□□ 1.78
CLIC4-204ENST00000497755 DDRGK1Q96HY6 314 aa26.15■■□□□ 1.78
CLIC4-204ENST00000497755 PUS7LQ9H0K6 701 aaKnown RBP26.15■■□□□ 1.78
CLIC4-204ENST00000497755 TTYH1Q9H313 450 aaPredicted RBP26.15■■□□□ 1.78
CLIC4-204ENST00000497755 DDX19BQ9UMR2 479 aa26.15■■□□□ 1.78
CLIC4-204ENST00000497755 CLTBP09497 229 aa26.14■■□□□ 1.78
CLIC4-204ENST00000497755 EPHB4P54760 987 aa26.14■■□□□ 1.78
CLIC4-204ENST00000497755 KIAA0355O15063 1070 aa26.13■■□□□ 1.77
CLIC4-204ENST00000497755 RAD21O60216 631 aa26.13■■□□□ 1.77
CLIC4-204ENST00000497755 MIER1Q8N108 512 aa26.13■■□□□ 1.77
CLIC4-204ENST00000497755 MYH7P12883 1935 aa26.12■■□□□ 1.77
CLIC4-204ENST00000497755 A0A1W2PQ45 241 aaPredicted RBP26.12■■□□□ 1.77
CLIC4-204ENST00000497755 A0A1W2PQY0 241 aa26.12■■□□□ 1.77
CLIC4-204ENST00000497755 AKR1A1P14550 325 aa26.12■■□□□ 1.77
CLIC4-204ENST00000497755 COPB2P35606 906 aa26.12■■□□□ 1.77
CLIC4-204ENST00000497755 LENG1Q96BZ8 264 aaPredicted RBP26.12■■□□□ 1.77
CLIC4-204ENST00000497755 ROBO3Q96MS0 1386 aa26.11■■□□□ 1.77
CLIC4-204ENST00000497755 PQBP1O60828 265 aaKnown RBP26.11■■□□□ 1.77
CLIC4-204ENST00000497755 ADAMTS4O75173 837 aa26.11■■□□□ 1.77
CLIC4-204ENST00000497755 MAFAQ8NHW3 353 aaPredicted RBP26.11■■□□□ 1.77
CLIC4-204ENST00000497755 MYLIPQ8WY64 445 aa26.11■■□□□ 1.77
CLIC4-204ENST00000497755 NUP88Q99567 741 aaPredicted RBP26.11■■□□□ 1.77
CLIC4-204ENST00000497755 SPTBN5Q9NRC6 3674 aaKnown RBP26.11■■□□□ 1.77
CLIC4-204ENST00000497755 SNAI1O95863 264 aaPredicted RBP26.1■■□□□ 1.77
CLIC4-204ENST00000497755 RAG1P15918 1043 aa26.1■■□□□ 1.77
CLIC4-204ENST00000497755 ZSCAN25Q6NSZ9 544 aa26.1■■□□□ 1.77
CLIC4-204ENST00000497755 STRBPQ96SI9 672 aaKnown RBP26.1■■□□□ 1.77
CLIC4-204ENST00000497755 TSEN34Q9BSV6 310 aaKnown RBP26.1■■□□□ 1.77
CLIC4-204ENST00000497755 CNPY2Q9Y2B0 182 aa26.1■■□□□ 1.77
CLIC4-204ENST00000497755 RIPK3Q9Y572 518 aa26.1■■□□□ 1.77
CLIC4-204ENST00000497755 RASA1P20936 1047 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms