RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 PPP2R3AQ06190 1150 aa6.72□□□□□ -1.33
CSMD3-208ENST00000497026 MPRIPQ6WCQ1 1025 aa6.72□□□□□ -1.33
CSMD3-208ENST00000497026 ZNF765Q7L2R6 523 aa6.72□□□□□ -1.33
CSMD3-208ENST00000497026 SULF2Q8IWU5 870 aa6.72□□□□□ -1.33
CSMD3-208ENST00000497026 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
CSMD3-208ENST00000497026 OSBPL7Q9BZF2 842 aa6.72□□□□□ -1.33
CSMD3-208ENST00000497026 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
CSMD3-208ENST00000497026 NINLQ9Y2I6 1382 aa6.71□□□□□ -1.33
CSMD3-208ENST00000497026 CYP26A1O43174 497 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 RNGTTO60942 597 aaKnown RBP6.71□□□□□ -1.34
CSMD3-208ENST00000497026 FOSL1P15407 271 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 FMR1Q06787 632 aaKnown RBP eCLIP6.71□□□□□ -1.34
CSMD3-208ENST00000497026 CHRNA2Q15822 529 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 MAP1SQ66K74 1059 aaPredicted RBP6.71□□□□□ -1.34
CSMD3-208ENST00000497026 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 C3orf58Q8NDZ4 430 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 ASB16Q96NS5 453 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 FANCD2OSQ96PS1 177 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 GSX1Q9H4S2 264 aaPredicted RBP6.71□□□□□ -1.34
CSMD3-208ENST00000497026 CBX8Q9HC52 389 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 PRDM11Q9NQV5 511 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 C1GALT1Q9NS00 363 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 BTG4Q9NY30 223 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 CRIM1Q9NZV1 1036 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 LTN1O94822 1766 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 OVOS2A0A0J9YW53 1432 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 OVOS2Q6IE36 1432 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 EDC4Q6P2E9 1401 aaKnown RBP6.71□□□□□ -1.34
CSMD3-208ENST00000497026 TTC21AQ8NDW8 1320 aa6.71□□□□□ -1.34
CSMD3-208ENST00000497026 USP31Q70CQ4 1352 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 GCP02774 474 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 SLFN14P0C7P3 912 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 HCLS1P14317 486 aaPredicted RBP6.7□□□□□ -1.34
CSMD3-208ENST00000497026 TAL1P17542 331 aaPredicted RBP6.7□□□□□ -1.34
CSMD3-208ENST00000497026 ARNTP27540 789 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 ZC3H6P61129 1189 aaKnown RBP6.7□□□□□ -1.34
CSMD3-208ENST00000497026 ID3Q02535 119 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 CDK5R2Q13319 367 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 TTLL4Q14679 1199 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 VPS72Q15906 364 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 PIDD1Q9HB75 910 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 DISC1Q9NRI5 854 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 WNK3Q9BYP7 1800 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 COL5A2P05997 1499 aaPredicted RBP6.7□□□□□ -1.34
CSMD3-208ENST00000497026 ANKRD36BQ8N2N9 1353 aa6.7□□□□□ -1.34
CSMD3-208ENST00000497026 KIF20BQ96Q89 1820 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 PAGE1O75459 146 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 WNT11O96014 354 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
CSMD3-208ENST00000497026 XRCC5P13010 732 aaKnown RBP6.69□□□□□ -1.34
CSMD3-208ENST00000497026 TMF1P82094 1093 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 KIF4BQ2VIQ3 1234 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 DUSP27Q5VZP5 1158 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 SEZ6L2Q6UXD5 910 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 NME9Q86XW9 330 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 GRIN3AQ8TCU5 1115 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 TRAIPQ9BWF2 469 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 PCDHGC5Q9Y5F6 944 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 CSADQ9Y600 493 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 ABCC6O95255 1503 aa6.69□□□□□ -1.34
CSMD3-208ENST00000497026 HSPA5P11021 654 aaKnown RBP6.68□□□□□ -1.34
CSMD3-208ENST00000497026 NME2P22392 152 aa6.68□□□□□ -1.34
CSMD3-208ENST00000497026 MSMPQ1L6U9 139 aa6.68□□□□□ -1.34
CSMD3-208ENST00000497026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSMD3-208ENST00000497026 GPBAR1Q8TDU6 330 aa6.68□□□□□ -1.34
CSMD3-208ENST00000497026 METTL22Q9BUU2 404 aaPredicted RBP6.68□□□□□ -1.34
CSMD3-208ENST00000497026 SPATA31A5Q5VU36 1347 aa6.68□□□□□ -1.34
CSMD3-208ENST00000497026 SPATA31A7Q8IWB4 1347 aa6.68□□□□□ -1.34
CSMD3-208ENST00000497026 AATKQ6ZMQ8 1374 aa6.68□□□□□ -1.34
CSMD3-208ENST00000497026 GSTT1P30711 240 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 HDGFL2Q7Z4V5 671 aaPredicted RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ARHGEF25Q86VW2 580 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 AEBP1Q8IUX7 1158 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 SMYD4Q8IYR2 804 aaPredicted RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ACSBG1Q96GR2 724 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 NECAB3Q96P71 396 aaPredicted RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ATXN3LQ9H3M9 355 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 KRT82Q9NSB4 513 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ZC3H7BQ9UGR2 993 aaKnown RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ANGEL1Q9UNK9 670 aaKnown RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 PARP4Q9UKK3 1724 aaKnown RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 SPATA31A1Q5TZJ5 1347 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 LRRC37A3O60309 1634 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ANKRD26Q9UPS8 1709 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ENC1O14682 589 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 LDHBP07195 334 aaKnown RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 NEFMP07197 916 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ATP2B2Q01814 1243 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 FBF1Q8TES7 1133 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 SSU72Q9NP77 194 aaKnown RBP6.67□□□□□ -1.34
CSMD3-208ENST00000497026 RNF19AQ9NV58 838 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 CCDC39Q9UFE4 941 aa6.67□□□□□ -1.34
CSMD3-208ENST00000497026 PEAK1Q9H792 1746 aa6.66□□□□□ -1.34
CSMD3-208ENST00000497026 EP400Q96L91 3159 aa6.66□□□□□ -1.34
CSMD3-208ENST00000497026 FAM87AP0C7U9 286 aa6.66□□□□□ -1.34
CSMD3-208ENST00000497026 BMP6P22004 513 aa6.66□□□□□ -1.34
CSMD3-208ENST00000497026 OGFOD3Q6PK18 319 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms