RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 ABRAQ8N0Z2 381 aa8.97□□□□□ -0.97
CDHR3-214ENST00000496633 STAG1Q8WVM7 1258 aa8.97□□□□□ -0.97
CDHR3-214ENST00000496633 BIN2Q9UBW5 565 aaPredicted RBP8.97□□□□□ -0.97
CDHR3-214ENST00000496633 CLIP2Q9UDT6 1046 aa8.97□□□□□ -0.97
CDHR3-214ENST00000496633 FEM1BQ9UK73 627 aa8.97□□□□□ -0.97
CDHR3-214ENST00000496633 STX8Q9UNK0 236 aa8.97□□□□□ -0.97
CDHR3-214ENST00000496633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDHR3-214ENST00000496633 PTCH2Q9Y6C5 1203 aa8.97□□□□□ -0.97
CDHR3-214ENST00000496633 U3KPZ7 1027 aaPredicted RBP8.97□□□□□ -0.97
CDHR3-214ENST00000496633 MGAMO43451 1857 aa8.97□□□□□ -0.97
CDHR3-214ENST00000496633 GREB1LQ9C091 1923 aaPredicted RBP8.96□□□□□ -0.97
CDHR3-214ENST00000496633 IGKV6D-41A0A0C4DH26 115 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 SLC15A5A6NIM6 579 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 RAD21O60216 631 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 ADCY3O60266 1144 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 ZBED4O75132 1171 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 CAPN15O75808 1086 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 DSG3P32926 999 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 FLT3LGP49771 235 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 PRKCZQ05513 592 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 CCDC129Q6ZRS4 1044 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 CEP95Q96GE4 821 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 GMCL1Q96IK5 515 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 ZNF333Q96JL9 665 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 SLF1Q9BQI6 1058 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 PAGR1Q9BTK6 254 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 RBPJLQ9UBG7 517 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 FBXO40Q9UH90 709 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 PPP1R9AQ9ULJ8 1098 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 ADAMTS5Q9UNA0 930 aa8.96□□□□□ -0.98
CDHR3-214ENST00000496633 ERICH2A1L162 156 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
CDHR3-214ENST00000496633 ATP2A1O14983 1001 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 PRDM1O75626 825 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 HMGCRP04035 888 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 TOP1P11387 765 aaKnown RBP8.95□□□□□ -0.98
CDHR3-214ENST00000496633 BMP3P12645 472 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 CHMLP26374 656 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 PDE4AP27815 886 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 SLC1A4P43007 532 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 NOVP48745 357 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 STAT2P52630 851 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 MLLT1Q03111 559 aaPredicted RBP8.95□□□□□ -0.98
CDHR3-214ENST00000496633 SART3Q15020 963 aaKnown RBP8.95□□□□□ -0.98
CDHR3-214ENST00000496633 VPS53Q5VIR6 699 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 ZNF589Q86UQ0 364 aaPredicted RBP8.95□□□□□ -0.98
CDHR3-214ENST00000496633 DGKHQ86XP1 1220 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 SIAH1Q8IUQ4 282 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDHR3-214ENST00000496633 TEX13BQ9BXU2 312 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 SPATC1LQ9H0A9 340 aa8.95□□□□□ -0.98
CDHR3-214ENST00000496633 MYH4Q9Y623 1939 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 VWA5AO00534 786 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 MSCO60682 206 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 NDUFB10O96000 172 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 GJB1P08034 283 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 HOXC6P09630 235 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 FCER1AP12319 257 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 GSPT1P15170 499 aaKnown RBP8.94□□□□□ -0.98
CDHR3-214ENST00000496633 PTPREP23469 700 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 CTDSPL2Q05D32 466 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 TRAF1Q13077 416 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 SHROOM1Q2M3G4 852 aaPredicted RBP8.94□□□□□ -0.98
CDHR3-214ENST00000496633 TKFCQ3LXA3 575 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 RRP12Q5JTH9 1297 aaKnown RBP8.94□□□□□ -0.98
CDHR3-214ENST00000496633 GPATCH4Q5T3I0 446 aaKnown RBP8.94□□□□□ -0.98
CDHR3-214ENST00000496633 WDR78Q5VTH9 848 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 MFSD14CQ5VZR4 134 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 SLFN13Q68D06 897 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 GPR142Q7Z601 462 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 RIOX2Q8IUF8 465 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 SPICE1Q8N0Z3 855 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 STK11IPQ8N1F8 1099 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 DCAF4Q8WV16 495 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 APBA2Q99767 749 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 UBAC1Q9BSL1 405 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 MTA3Q9BTC8 594 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 ARHGAP39Q9C0H5 1083 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 MAF1Q9H063 256 aa8.94□□□□□ -0.98
CDHR3-214ENST00000496633 DIS3Q9Y2L1 958 aaKnown RBP8.94□□□□□ -0.98
CDHR3-214ENST00000496633 RBBP6Q7Z6E9 1792 aaKnown RBP8.94□□□□□ -0.98
CDHR3-214ENST00000496633 FOXP2O15409 715 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 SGSM2O43147 1006 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 ZKSCAN1P17029 563 aaPredicted RBP8.93□□□□□ -0.98
CDHR3-214ENST00000496633 STAT3P40763 770 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 EVX2Q03828 476 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 IKQ13123 557 aaPredicted RBP8.93□□□□□ -0.98
CDHR3-214ENST00000496633 GRB14Q14449 540 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 PLS1Q14651 629 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 KCTD2Q14681 263 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 FAM47AQ5JRC9 791 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 FAM83BQ5T0W9 1011 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 RALYLQ86SE5 291 aaKnown RBP8.93□□□□□ -0.98
CDHR3-214ENST00000496633 DPP9Q86TI2 863 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 MSL3Q8N5Y2 521 aaKnown RBP8.93□□□□□ -0.98
CDHR3-214ENST00000496633 CHST13Q8NET6 341 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 TXNRD2Q9NNW7 524 aa8.93□□□□□ -0.98
CDHR3-214ENST00000496633 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms