RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 FOXP2O15409 715 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 PRDM1O75626 825 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 LHX8Q68G74 356 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 SHCBP1Q8NEM2 672 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 MKNK2Q9HBH9 465 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 IVNS1ABPQ9Y6Y0 642 aa17.06■□□□□ 0.32
VTI1A-209ENST00000496445 APPP05067 770 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 ADORA2AP29274 412 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 PDE1AP54750 535 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 TMEM132BQ14DG7 1078 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 NECAB2Q7Z6G3 386 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 GOPCQ9HD26 462 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 ADAMTS5Q9UNA0 930 aa17.05■□□□□ 0.32
VTI1A-209ENST00000496445 PLS1Q14651 629 aa17.04■□□□□ 0.32
VTI1A-209ENST00000496445 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
VTI1A-209ENST00000496445 CHRDL2Q6WN34 429 aa17.04■□□□□ 0.32
VTI1A-209ENST00000496445 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
VTI1A-209ENST00000496445 NYAP2Q9P242 653 aa17.04■□□□□ 0.32
VTI1A-209ENST00000496445 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
VTI1A-209ENST00000496445 PFASO15067 1338 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 RAD21O60216 631 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 COBLO75128 1261 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 TRPV1Q8NER1 839 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 CEP95Q96GE4 821 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 NUP88Q99567 741 aaPredicted RBP17.03■□□□□ 0.32
VTI1A-209ENST00000496445 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 NAPBQ9H115 298 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 MROH8Q9H579 483 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 C11orf49Q9H6J7 331 aa17.03■□□□□ 0.32
VTI1A-209ENST00000496445 STRNO43815 780 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 EVI5O60447 810 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 NDUFB10O96000 172 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 CYBAP13498 195 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 CYP2C19P33261 490 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 FXR1P51114 621 aaKnown RBP eCLIP17.02■□□□□ 0.32
VTI1A-209ENST00000496445 PPARAQ07869 468 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 MFSD14CQ5VZR4 134 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 NCAPG2Q86XI2 1143 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 SMC5Q8IY18 1101 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 NBPF3Q9H094 633 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 PRO3102Q9H379 93 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
VTI1A-209ENST00000496445 ZNF214Q9UL59 606 aaPredicted RBP17.02■□□□□ 0.32
VTI1A-209ENST00000496445 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
VTI1A-209ENST00000496445 F5H6K3 240 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 VWA5AO00534 786 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 COL6A1P12109 1028 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 KLRC3Q07444 240 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 AAMPQ13685 434 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 DPP9Q86TI2 863 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 RIOX2Q8IUF8 465 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 ABRAQ8N0Z2 381 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 ZNF287Q9HBT7 754 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 RBM27Q9P2N5 1060 aaKnown RBP17.01■□□□□ 0.31
VTI1A-209ENST00000496445 CLIP2Q9UDT6 1046 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
VTI1A-209ENST00000496445 TACC3Q9Y6A5 838 aa17.01■□□□□ 0.31
VTI1A-209ENST00000496445 A0A0D9SFI3 127 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 SLC25A27O95847 323 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 FAM47AQ5JRC9 791 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 ZNF444Q8N0Y2 327 aaPredicted RBP17■□□□□ 0.31
VTI1A-209ENST00000496445 LRRC47Q8N1G4 583 aaKnown RBP17■□□□□ 0.31
VTI1A-209ENST00000496445 NEDD1Q8NHV4 660 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 MKL1Q969V6 931 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 FAM227BQ96M60 508 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 SLF1Q9BQI6 1058 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
VTI1A-209ENST00000496445 LAMA4Q16363 1823 aa17■□□□□ 0.31
VTI1A-209ENST00000496445 IGHDP01880 384 aa16.99■□□□□ 0.31
VTI1A-209ENST00000496445 TSPY3P0CV98 308 aa16.99■□□□□ 0.31
VTI1A-209ENST00000496445 TSPY8P0CW00 308 aa16.99■□□□□ 0.31
VTI1A-209ENST00000496445 PDE4BQ07343 736 aa16.99■□□□□ 0.31
VTI1A-209ENST00000496445 C7orf61Q8IZ16 206 aa16.99■□□□□ 0.31
VTI1A-209ENST00000496445 SYNPO2Q9UMS6 1093 aa16.99■□□□□ 0.31
VTI1A-209ENST00000496445 TTLL1O95922 423 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 FCER1AP12319 257 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 STAT3P40763 770 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 TFAP4Q01664 338 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 CTDSPL2Q05D32 466 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 GMCL1P1Q8NEA9 526 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 MAML3Q96JK9 1138 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 MMP19Q99542 508 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 INCENPQ9NQS7 918 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
VTI1A-209ENST00000496445 PGK2P07205 417 aa16.97■□□□□ 0.31
VTI1A-209ENST00000496445 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
VTI1A-209ENST00000496445 CNGA1P29973 690 aa16.97■□□□□ 0.31
VTI1A-209ENST00000496445 ZNF589Q86UQ0 364 aaPredicted RBP16.97■□□□□ 0.31
VTI1A-209ENST00000496445 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms