RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
NEPRO-224ENST00000496340 RAD21O60216 631 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 PTPREP23469 700 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 MAPK4P31152 587 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 UBE2Q1Q7Z7E8 422 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 RNF208Q9H0X6 261 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
NEPRO-224ENST00000496340 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 TAF6LQ9Y6J9 622 aa12.94□□□□□ -0.34
NEPRO-224ENST00000496340 NEDD4P46934 1319 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 VWA5AO00534 786 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 ORC4O43929 436 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 COBLO75128 1261 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 ERCC3P19447 782 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
NEPRO-224ENST00000496340 PDE4BQ07343 736 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 GRB14Q14449 540 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 GTF3C2Q8WUA4 911 aaPredicted RBP12.93□□□□□ -0.34
NEPRO-224ENST00000496340 NUDT12Q9BQG2 462 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 TMEM106CQ9BVX2 250 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 PAK6Q9NQU5 681 aaPredicted RBP12.93□□□□□ -0.34
NEPRO-224ENST00000496340 ZNF214Q9UL59 606 aaPredicted RBP12.93□□□□□ -0.34
NEPRO-224ENST00000496340 PPP1R9AQ9ULJ8 1098 aa12.93□□□□□ -0.34
NEPRO-224ENST00000496340 RANBP6O60518 1105 aaKnown RBP12.92□□□□□ -0.34
NEPRO-224ENST00000496340 TTLL1O95922 423 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 GJB1P08034 283 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 XRCC5P13010 732 aaKnown RBP12.92□□□□□ -0.34
NEPRO-224ENST00000496340 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
NEPRO-224ENST00000496340 CHMLP26374 656 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 GJA8P48165 433 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 PTH1RQ03431 593 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 CACNB2Q08289 660 aaPredicted RBP12.92□□□□□ -0.34
NEPRO-224ENST00000496340 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 WDR78Q5VTH9 848 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 TRPV1Q8NER1 839 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 DEFB118Q96PH6 123 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 SH2D4AQ9H788 454 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 GOPCQ9HD26 462 aa12.92□□□□□ -0.34
NEPRO-224ENST00000496340 ZMYM6O95789 1325 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 SLC15A5A6NIM6 579 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 SGPL1O95470 568 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 HMGCRP04035 888 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 MCCP23508 829 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
NEPRO-224ENST00000496340 SNAP25P60880 206 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 COL9A3Q14050 684 aaPredicted RBP12.91□□□□□ -0.34
NEPRO-224ENST00000496340 PLS1Q14651 629 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 RRP12Q5JTH9 1297 aaKnown RBP12.91□□□□□ -0.34
NEPRO-224ENST00000496340 SLFN13Q68D06 897 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 GMCL1P1Q8NEA9 526 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 U2AF1L4Q8WU68 220 aaKnown RBP12.91□□□□□ -0.34
NEPRO-224ENST00000496340 STAG1Q8WVM7 1258 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 DIAPH3Q9NSV4 1193 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
NEPRO-224ENST00000496340 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.34
NEPRO-224ENST00000496340 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
NEPRO-224ENST00000496340 ADORA2AP29274 412 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 UBXN2AP68543 259 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 TTBK2Q6IQ55 1244 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 KCTD1Q719H9 257 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 NCAPG2Q86XI2 1143 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 DIS3LQ8TF46 1054 aaKnown RBP12.9□□□□□ -0.34
NEPRO-224ENST00000496340 SLF1Q9BQI6 1058 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
NEPRO-224ENST00000496340 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
NEPRO-224ENST00000496340 ZNF536O15090 1300 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 PGK2P07205 417 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 SLC3A2P08195 630 aaKnown RBP12.89□□□□□ -0.35
NEPRO-224ENST00000496340 HOXC6P09630 235 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 CYP2C19P33261 490 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 STAT3P40763 770 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 RGS2P41220 211 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 CCNA1P78396 465 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 LHX8Q68G74 356 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 MB21D1Q8N884 522 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 SHCBP1Q8NEM2 672 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 SOCS4Q8WXH5 440 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 APBA2Q99767 749 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 ZNF287Q9HBT7 754 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
NEPRO-224ENST00000496340 STX8Q9UNK0 236 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 MTMR7Q9Y216 660 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 DNAH12Q6ZR08 3092 aa12.89□□□□□ -0.35
NEPRO-224ENST00000496340 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 BMP3P12645 472 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms