RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 NUP88Q99567 741 aaPredicted RBP14.64□□□□□ -0.07
TRIM59-207ENST00000496222 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
TRIM59-207ENST00000496222 MOV10L1Q9BXT6 1211 aaKnown RBP14.64□□□□□ -0.07
TRIM59-207ENST00000496222 SPATC1LQ9H0A9 340 aa14.64□□□□□ -0.07
TRIM59-207ENST00000496222 UNC93B1Q9H1C4 597 aa14.64□□□□□ -0.07
TRIM59-207ENST00000496222 SYNPO2Q9UMS6 1093 aa14.64□□□□□ -0.07
TRIM59-207ENST00000496222 DNAH12Q6ZR08 3092 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 TTLL1O95922 423 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 GJB1P08034 283 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 TSPY3P0CV98 308 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 TSPY8P0CW00 308 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 PTPREP23469 700 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 CCNA1P78396 465 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 TMEM132BQ14DG7 1078 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 MAP3K21Q5TCX8 1036 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 MB21D1Q8N884 522 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 GMCL1P1Q8NEA9 526 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 SOCS4Q8WXH5 440 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 TRIB2Q92519 343 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 NUDT12Q9BQG2 462 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 PPP1R9AQ9ULJ8 1098 aa14.63□□□□□ -0.07
TRIM59-207ENST00000496222 HIP1O00291 1037 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 VWA5AO00534 786 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 NMT2O60551 498 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 HMGCRP04035 888 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 CYP2B6P20813 491 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 GJA8P48165 433 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 UBXN2AP68543 259 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 GRB14Q14449 540 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 UBE2Q1Q7Z7E8 422 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 TBC1D10CQ8IV04 446 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 LRRC47Q8N1G4 583 aaKnown RBP14.62□□□□□ -0.07
TRIM59-207ENST00000496222 SHCBP1Q8NEM2 672 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 RNF208Q9H0X6 261 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 PAK6Q9NQU5 681 aaPredicted RBP14.62□□□□□ -0.07
TRIM59-207ENST00000496222 DIAPH3Q9NSV4 1193 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
TRIM59-207ENST00000496222 LAMA4Q16363 1823 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 ZNF236Q9UL36 1845 aa14.62□□□□□ -0.07
TRIM59-207ENST00000496222 SLC15A5A6NIM6 579 aa14.61□□□□□ -0.07
TRIM59-207ENST00000496222 HOXC6P09630 235 aa14.61□□□□□ -0.07
TRIM59-207ENST00000496222 ERCC3P19447 782 aa14.61□□□□□ -0.07
TRIM59-207ENST00000496222 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
TRIM59-207ENST00000496222 HAND2P61296 217 aa14.61□□□□□ -0.07
TRIM59-207ENST00000496222 CCL14Q16627 93 aa14.61□□□□□ -0.07
TRIM59-207ENST00000496222 STAG1Q8WVM7 1258 aa14.61□□□□□ -0.07
TRIM59-207ENST00000496222 DSCC1Q9BVC3 393 aa14.61□□□□□ -0.07
TRIM59-207ENST00000496222 ZNF214Q9UL59 606 aaPredicted RBP14.61□□□□□ -0.07
TRIM59-207ENST00000496222 TSPY2A6NKD2 308 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 CHMLP26374 656 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 RGS2P41220 211 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 MAP2K5Q13163 448 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 AKNAD1Q5T1N1 836 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 APBA2Q99767 749 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 TCP11L1Q9NUJ3 509 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 FLRT1Q9NZU1 646 aa14.6□□□□□ -0.07
TRIM59-207ENST00000496222 ZNFX1Q9P2E3 1918 aaKnown RBP14.6□□□□□ -0.07
TRIM59-207ENST00000496222 STRNO43815 780 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 RAD21O60216 631 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 RANBP6O60518 1105 aaKnown RBP14.59□□□□□ -0.07
TRIM59-207ENST00000496222 COBLO75128 1261 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 SGPL1O95470 568 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 SLFN13Q68D06 897 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 RCSD1Q6JBY9 416 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 SKAP1Q86WV1 359 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 RIOX2Q8IUF8 465 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
TRIM59-207ENST00000496222 NPLOC4Q8TAT6 608 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 U2AF1L4Q8WU68 220 aaKnown RBP14.59□□□□□ -0.07
TRIM59-207ENST00000496222 GMCL1Q96IK5 515 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 SLF1Q9BQI6 1058 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 CRISPLD2Q9H0B8 497 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 NEDD4P46934 1319 aa14.59□□□□□ -0.07
TRIM59-207ENST00000496222 PCP11498 1178 aaKnown RBP14.58□□□□□ -0.08
TRIM59-207ENST00000496222 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
TRIM59-207ENST00000496222 WDR78Q5VTH9 848 aa14.58□□□□□ -0.08
TRIM59-207ENST00000496222 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
TRIM59-207ENST00000496222 RASGRP2Q7LDG7 609 aa14.58□□□□□ -0.08
TRIM59-207ENST00000496222 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.08
TRIM59-207ENST00000496222 ABRAQ8N0Z2 381 aa14.58□□□□□ -0.08
TRIM59-207ENST00000496222 PRPF38AQ8NAV1 312 aaKnown RBP14.58□□□□□ -0.08
TRIM59-207ENST00000496222 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRIM59-207ENST00000496222 MROH8Q9H579 483 aa14.58□□□□□ -0.08
TRIM59-207ENST00000496222 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
TRIM59-207ENST00000496222 STX8Q9UNK0 236 aa14.58□□□□□ -0.08
TRIM59-207ENST00000496222 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
TRIM59-207ENST00000496222 ZNF213O14771 459 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 ATP2A1O14983 1001 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 PLA2G6O60733 806 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 SLC25A27O95847 323 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 BMP3P12645 472 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 ZKSCAN1P17029 563 aaPredicted RBP14.57□□□□□ -0.08
TRIM59-207ENST00000496222 ADORA2AP29274 412 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 STAT3P40763 770 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 PLS1Q14651 629 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 PPP4R3BQ5MIZ7 849 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 MFSD6Q6ZSS7 791 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 DEFB118Q96PH6 123 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 SLC38A10Q9HBR0 1119 aa14.57□□□□□ -0.08
TRIM59-207ENST00000496222 FEM1BQ9UK73 627 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms