RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 EGFRP00533 1210 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 EEF2P13639 858 aaKnown RBP18.86■□□□□ 0.61
HLA-A-208ENST00000496081 JAG1P78504 1218 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 ATP2B2Q01814 1243 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 SEPT2Q15019 361 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 PTPAQ15257 358 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 GPR162Q16538 588 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 ASPRV1Q53RT3 343 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 LRSAM1Q6UWE0 723 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 MKL1Q969V6 931 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 TMEM39BQ9GZU3 492 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 NYAP2Q9P242 653 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 ZNF541Q9H0D2 1346 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 NLRP5P59047 1200 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 RILPL1Q5EBL4 403 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 ADALQ6DHV7 355 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 CDAN1Q8IWY9 1227 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 MICALL2Q8IY33 904 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 TNFRSF25Q93038 417 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 UBA5Q9GZZ9 404 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 BRMS1Q9HCU9 246 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 DACT1Q9NYF0 836 aa18.85■□□□□ 0.61
HLA-A-208ENST00000496081 ZNF543Q08ER8 600 aa18.84■□□□□ 0.61
HLA-A-208ENST00000496081 L1TD1Q5T7N2 865 aaKnown RBP18.84■□□□□ 0.61
HLA-A-208ENST00000496081 RBM26Q5T8P6 1007 aaKnown RBP18.84■□□□□ 0.61
HLA-A-208ENST00000496081 WWC2Q6AWC2 1192 aa18.84■□□□□ 0.61
HLA-A-208ENST00000496081 ARHGAP27Q6ZUM4 889 aa18.84■□□□□ 0.61
HLA-A-208ENST00000496081 CCAR1Q8IX12 1150 aaKnown RBP18.84■□□□□ 0.61
HLA-A-208ENST00000496081 RIOX1Q9H6W3 641 aa18.84■□□□□ 0.61
HLA-A-208ENST00000496081 CABP5Q9NP86 173 aa18.84■□□□□ 0.61
HLA-A-208ENST00000496081 PGAP2Q9UHJ9 254 aa18.84■□□□□ 0.61
HLA-A-208ENST00000496081 NR1I2O75469 434 aa18.83■□□□□ 0.61
HLA-A-208ENST00000496081 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.61
HLA-A-208ENST00000496081 GH2P01242 217 aa18.83■□□□□ 0.61
HLA-A-208ENST00000496081 EARS2Q5JPH6 523 aaKnown RBP18.83■□□□□ 0.61
HLA-A-208ENST00000496081 TYW1BQ6NUM6 668 aa18.83■□□□□ 0.61
HLA-A-208ENST00000496081 RRP36Q96EU6 259 aaKnown RBP18.83■□□□□ 0.61
HLA-A-208ENST00000496081 GOLPH3LQ9H4A5 285 aa18.83■□□□□ 0.61
HLA-A-208ENST00000496081 BARHL2Q9NY43 387 aa18.83■□□□□ 0.61
HLA-A-208ENST00000496081 CNOT7Q9UIV1 285 aaKnown RBP18.83■□□□□ 0.61
HLA-A-208ENST00000496081 A0A1W2PQ27 194 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 A0A1W2PQ64 194 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 A0A1W2PQD8 194 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 FAM205CA6NFA0 338 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 ICA1Q05084 483 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 SAMD7Q7Z3H4 446 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 GRPEL1Q9HAV7 217 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 VAT1LQ9HCJ6 419 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 GPCPD1Q9NPB8 672 aa18.83■□□□□ 0.6
HLA-A-208ENST00000496081 STXBP3O00186 592 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 ADAMTS3O15072 1205 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 TBC1D12O60347 775 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 PPP6R2O75170 966 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 CALML3P27482 149 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 MARCKSP29966 332 aaPredicted RBP18.82■□□□□ 0.6
HLA-A-208ENST00000496081 MRE11P49959 708 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 AXDND1Q5T1B0 1012 aaPredicted RBP18.82■□□□□ 0.6
HLA-A-208ENST00000496081 HEATR3Q7Z4Q2 680 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 HOMER1Q86YM7 354 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 PIGSQ96S52 555 aa18.82■□□□□ 0.6
HLA-A-208ENST00000496081 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.82■□□□□ 0.6
HLA-A-208ENST00000496081 DDX19AQ9NUU7 478 aaKnown RBP18.82■□□□□ 0.6
HLA-A-208ENST00000496081 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
HLA-A-208ENST00000496081 LMNB1P20700 586 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 TBC1D10BQ4KMP7 808 aaPredicted RBP18.81■□□□□ 0.6
HLA-A-208ENST00000496081 NOM1Q5C9Z4 860 aaKnown RBP18.81■□□□□ 0.6
HLA-A-208ENST00000496081 GPATCH4Q5T3I0 446 aaKnown RBP18.81■□□□□ 0.6
HLA-A-208ENST00000496081 NUP62CLQ9H1M0 184 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 PCDHB6Q9Y5E3 794 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 XRCC6P12956 609 aaKnown RBP eCLIP18.81■□□□□ 0.6
HLA-A-208ENST00000496081 TNNI2P48788 182 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 RASA3Q14644 834 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 TTBK2Q6IQ55 1244 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 BLIDQ8IZY5 108 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 FAM177A1Q8N128 213 aaPredicted RBP18.81■□□□□ 0.6
HLA-A-208ENST00000496081 ENGASEQ8NFI3 743 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 CCDC148Q8NFR7 591 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 SEC63Q9UGP8 760 aaKnown RBP18.81■□□□□ 0.6
HLA-A-208ENST00000496081 PCDHA4Q9UN74 947 aa18.81■□□□□ 0.6
HLA-A-208ENST00000496081 SCAF8Q9UPN6 1271 aaKnown RBP18.81■□□□□ 0.6
HLA-A-208ENST00000496081 SBF1O95248 1867 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 UTRNP46939 3433 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 MAP3K10Q02779 954 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 SNW1Q13573 536 aaKnown RBP18.8■□□□□ 0.6
HLA-A-208ENST00000496081 CCDC73Q6ZRK6 1079 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 KCTD1Q719H9 257 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 MIGA2Q7L4E1 593 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 JMYQ8N9B5 988 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 FSIP1Q8NA03 581 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 MRPS27Q92552 414 aaKnown RBP18.8■□□□□ 0.6
HLA-A-208ENST00000496081 CLSTN2Q9H4D0 955 aa18.8■□□□□ 0.6
HLA-A-208ENST00000496081 ASTN2O75129 1339 aaPredicted RBP18.79■□□□□ 0.6
HLA-A-208ENST00000496081 ATP2B1P20020 1258 aa18.79■□□□□ 0.6
HLA-A-208ENST00000496081 FAM160A1Q05DH4 1040 aa18.79■□□□□ 0.6
HLA-A-208ENST00000496081 CAMK4Q16566 473 aa18.79■□□□□ 0.6
HLA-A-208ENST00000496081 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
HLA-A-208ENST00000496081 SLFN13Q68D06 897 aa18.79■□□□□ 0.6
HLA-A-208ENST00000496081 GALNT17Q6IS24 598 aa18.79■□□□□ 0.6
HLA-A-208ENST00000496081 ADGRF4Q8IZF3 695 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms