RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 FAM83BQ5T0W9 1011 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 WDR78Q5VTH9 848 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 LHX8Q68G74 356 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 CCDC129Q6ZRS4 1044 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 ABRAQ8N0Z2 381 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 REPS2Q8NFH8 660 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 NEDD1Q8NHV4 660 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 NPLOC4Q8TAT6 608 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 PAWRQ96IZ0 340 aaKnown RBP8.6□□□□□ -1.03
VPS52-221ENST00000495755 HTATIP2Q9BUP3 242 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 NAPBQ9H115 298 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 HELLSQ9NRZ9 838 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 MTMR4Q9NYA4 1195 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 CLIP2Q9UDT6 1046 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 PPP1R9AQ9ULJ8 1098 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 SYNPO2Q9UMS6 1093 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 A0A0G2JMZ2 1700 aa8.6□□□□□ -1.03
VPS52-221ENST00000495755 VWA5AO00534 786 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 COBLO75128 1261 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 SLC25A27O95847 323 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 NDUFB10O96000 172 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 SLC3A2P08195 630 aaKnown RBP8.59□□□□□ -1.03
VPS52-221ENST00000495755 ADORA2AP29274 412 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 CCND3P30281 292 aaPredicted RBP8.59□□□□□ -1.03
VPS52-221ENST00000495755 PDE4BQ07343 736 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 PLS1Q14651 629 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 FAM47AQ5JRC9 791 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.03
VPS52-221ENST00000495755 VPS53Q5VIR6 699 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 MFSD14CQ5VZR4 134 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 NECAB2Q7Z6G3 386 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 CHD1LQ86WJ1 897 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 DIS3LQ8TF46 1054 aaKnown RBP8.59□□□□□ -1.03
VPS52-221ENST00000495755 CEP95Q96GE4 821 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 FAM227BQ96M60 508 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 NUP88Q99567 741 aaPredicted RBP8.59□□□□□ -1.03
VPS52-221ENST00000495755 OSBPL3Q9H4L5 887 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 ANAPC4Q9UJX5 808 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 ZNF214Q9UL59 606 aaPredicted RBP8.59□□□□□ -1.03
VPS52-221ENST00000495755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS52-221ENST00000495755 TACC3Q9Y6A5 838 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 PLIN4Q96Q06 1357 aa8.59□□□□□ -1.03
VPS52-221ENST00000495755 LAMA2P24043 3122 aaKnown RBP8.58□□□□□ -1.04
VPS52-221ENST00000495755 A0A0D9SFI3 127 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 RAD21O60216 631 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 TTLL1O95922 423 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 FGRP09769 529 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 TSPY3P0CV98 308 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 TSPY8P0CW00 308 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 CYP2C19P33261 490 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 STAT3P40763 770 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 TFAP4Q01664 338 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 CTDSPL2Q05D32 466 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 MCMDC2Q4G0Z9 681 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 OLFML2BQ68BL8 750 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 SAMD1Q6SPF0 538 aaPredicted RBP8.58□□□□□ -1.04
VPS52-221ENST00000495755 DPP9Q86TI2 863 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 NCAPG2Q86XI2 1143 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 RIOX2Q8IUF8 465 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 PRPF38AQ8NAV1 312 aaKnown RBP8.58□□□□□ -1.04
VPS52-221ENST00000495755 GMCL1P1Q8NEA9 526 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 TRPV1Q8NER1 839 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 SLF1Q9BQI6 1058 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 NBPF3Q9H094 633 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 C11orf49Q9H6J7 331 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 INCENPQ9NQS7 918 aa8.58□□□□□ -1.04
VPS52-221ENST00000495755 COLQQ9Y215 455 aaPredicted RBP8.58□□□□□ -1.04
VPS52-221ENST00000495755 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
VPS52-221ENST00000495755 PARP14Q460N5 1801 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 ZNF236Q9UL36 1845 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 ATP2A1O14983 1001 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 EVI5O60447 810 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 FGAP02671 866 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 HSPD1P10809 573 aaKnown RBP8.57□□□□□ -1.04
VPS52-221ENST00000495755 COL6A1P12109 1028 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 FCER1AP12319 257 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 NOVP48745 357 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 NMIQ13287 307 aaPredicted RBP8.57□□□□□ -1.04
VPS52-221ENST00000495755 ZNF589Q86UQ0 364 aaPredicted RBP8.57□□□□□ -1.04
VPS52-221ENST00000495755 PRO3102Q9H379 93 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 IL17RBQ9NRM6 502 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 SLC5A4Q9NY91 659 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 DDX20Q9UHI6 824 aaKnown RBP8.57□□□□□ -1.04
VPS52-221ENST00000495755 NR2E3Q9Y5X4 410 aa8.57□□□□□ -1.04
VPS52-221ENST00000495755 TRIM6-TRIM34B2RNG4 842 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 ORC4O43929 436 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 ZBED4O75132 1171 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 BMP3P12645 472 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 CYBAP13498 195 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 SDSP20132 328 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 COPB2P35606 906 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 ZNF792Q3KQV3 632 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 SLFN13Q68D06 897 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 LRRC47Q8N1G4 583 aaKnown RBP8.56□□□□□ -1.04
VPS52-221ENST00000495755 RILPL2Q969X0 211 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 GMCL1Q96IK5 515 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms