RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 AKR1A1P14550 325 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-209ENST00000495677 PLS1Q14651 629 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 RASIP1Q5U651 963 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 SIAH1Q8IUQ4 282 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 SLC44A5Q8NCS7 719 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 KLHDC9Q8NEP7 349 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 TIFAQ96CG3 184 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 ATG4CQ96DT6 458 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-209ENST00000495677 TCF20Q9UGU0 1960 aaKnown RBP16.32■□□□□ 0.2
COL1A1-209ENST00000495677 SWAP70Q9UH65 585 aa16.32■□□□□ 0.2
COL1A1-209ENST00000495677 MOXD2PA6NHM9 499 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 WDR46O15213 610 aaKnown RBP16.31■□□□□ 0.2
COL1A1-209ENST00000495677 FLOT1O75955 427 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 PGK1P00558 417 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 MFSD5Q6N075 450 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 MSL3Q8N5Y2 521 aaKnown RBP16.31■□□□□ 0.2
COL1A1-209ENST00000495677 GAS2L1Q99501 681 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-209ENST00000495677 ANTXR1Q9H6X2 564 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 VCPKMTQ9H867 229 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
COL1A1-209ENST00000495677 MROH7Q68CQ1 1323 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 MAGEB6P1A0A0J9YX57 407 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
COL1A1-209ENST00000495677 PQBP1O60828 265 aaKnown RBP16.3■□□□□ 0.2
COL1A1-209ENST00000495677 COPB2P35606 906 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 CDK7P50613 346 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 ACLYP53396 1101 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 CCSAPQ6IQ19 270 aaPredicted RBP16.3■□□□□ 0.2
COL1A1-209ENST00000495677 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 MMP19Q99542 508 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL1A1-209ENST00000495677 CRNKL1Q9BZJ0 848 aaKnown RBP16.3■□□□□ 0.2
COL1A1-209ENST00000495677 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 MCM9Q9NXL9 1143 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
COL1A1-209ENST00000495677 TBX21Q9UL17 535 aa16.3■□□□□ 0.2
COL1A1-209ENST00000495677 MYH7P12883 1935 aa16.29■□□□□ 0.2
COL1A1-209ENST00000495677 ELP1O95163 1332 aa16.29■□□□□ 0.2
COL1A1-209ENST00000495677 PPIGQ13427 754 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL1A1-209ENST00000495677 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-209ENST00000495677 TMEM240Q5SV17 173 aa16.29■□□□□ 0.2
COL1A1-209ENST00000495677 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
COL1A1-209ENST00000495677 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
COL1A1-209ENST00000495677 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-209ENST00000495677 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
COL1A1-209ENST00000495677 BCAR3O75815 825 aa16.28■□□□□ 0.2
COL1A1-209ENST00000495677 TAL1P17542 331 aaPredicted RBP16.28■□□□□ 0.2
COL1A1-209ENST00000495677 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
COL1A1-209ENST00000495677 STAT3P40763 770 aa16.28■□□□□ 0.2
COL1A1-209ENST00000495677 KCTD2Q14681 263 aa16.28■□□□□ 0.2
COL1A1-209ENST00000495677 MAMDC4Q6UXC1 1216 aa16.28■□□□□ 0.2
COL1A1-209ENST00000495677 C16orf59Q7L2K0 433 aa16.28■□□□□ 0.2
COL1A1-209ENST00000495677 PBX4Q9BYU1 374 aa16.28■□□□□ 0.2
COL1A1-209ENST00000495677 THEGQ9P2T0 379 aa16.28■□□□□ 0.2
COL1A1-209ENST00000495677 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.2
COL1A1-209ENST00000495677 SYNGAP1Q96PV0 1343 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 VWA5AO00534 786 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 DUSP11O75319 330 aaKnown RBP16.27■□□□□ 0.2
COL1A1-209ENST00000495677 PGK2P07205 417 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 MRPS5P82675 430 aaKnown RBP16.27■□□□□ 0.2
COL1A1-209ENST00000495677 EVX2Q03828 476 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 KCNA10Q16322 511 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 TMEM57Q8N5G2 664 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 CLUAP1Q96AJ1 413 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 ZNF214Q9UL59 606 aaPredicted RBP16.27■□□□□ 0.2
COL1A1-209ENST00000495677 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
COL1A1-209ENST00000495677 CHD9Q3L8U1 2897 aa16.26■□□□□ 0.19
COL1A1-209ENST00000495677 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
COL1A1-209ENST00000495677 MYH4Q9Y623 1939 aa16.26■□□□□ 0.19
COL1A1-209ENST00000495677 ICA1Q05084 483 aa16.26■□□□□ 0.19
COL1A1-209ENST00000495677 SPICE1Q8N0Z3 855 aa16.26■□□□□ 0.19
COL1A1-209ENST00000495677 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
COL1A1-209ENST00000495677 REPS2Q8NFH8 660 aa16.26■□□□□ 0.19
COL1A1-209ENST00000495677 GLT1D1Q96MS3 346 aa16.26■□□□□ 0.19
COL1A1-209ENST00000495677 DNAJC25-GNG10A0A024R161 153 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 SNAI1O95863 264 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-209ENST00000495677 PDE6AP16499 860 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 PLA2G5P39877 138 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 PBX2P40425 430 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 SLC9C2Q5TAH2 1124 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 ZNF467Q7Z7K2 595 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-209ENST00000495677 TMEM199Q8N511 208 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL1A1-209ENST00000495677 SDR42E1Q8WUS8 393 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-209ENST00000495677 ATP8A2Q9NTI2 1148 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 PPP1R9AQ9ULJ8 1098 aa16.25■□□□□ 0.19
COL1A1-209ENST00000495677 ARVCFO00192 962 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 AKR1B1P15121 316 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 NKX3-2P78367 333 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 PSRC1Q6PGN9 363 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-209ENST00000495677 CCDC129Q6ZRS4 1044 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms