RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 RNF111Q6ZNA4 994 aa8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 TTC6Q86TZ1 520 aa8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 C19orf47Q8N9M1 422 aaKnown RBP8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 PHAXQ9H814 394 aaKnown RBP8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 TMEM59LQ9UK28 342 aa8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 CTNND2Q9UQB3 1225 aa8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 PCDHA11Q9Y5I1 949 aa8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 WASH4PA8MWX3 477 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 SIGLEC6O43699 453 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 ACRP10323 421 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 DUSP4Q13115 394 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 OXR1Q8N573 874 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 PRDM14Q9GZV8 571 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 CHST7Q9NS84 486 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 RNF114Q9Y508 228 aa8.53□□□□□ -1.04
NCKAP1-208ENST00000495619 SHISA3A0PJX4 238 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 SSBP05455 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 TXKP42681 527 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 PPP2R5EQ16537 467 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 KCNMB1Q16558 191 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 NOL9Q5SY16 702 aaKnown RBP8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 RUFY4Q6ZNE9 571 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 TMC3Q7Z5M5 1100 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 SPPL2CQ8IUH8 684 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 C7orf61Q8IZ16 206 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 DSCC1Q9BVC3 393 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 HDAC8Q9BY41 377 aa8.52□□□□□ -1.05
NCKAP1-208ENST00000495619 ATF4P18848 351 aaPredicted RBP8.51□□□□□ -1.05
NCKAP1-208ENST00000495619 TCEAL1Q15170 157 aa8.51□□□□□ -1.05
NCKAP1-208ENST00000495619 ANKRD39Q53RE8 183 aa8.51□□□□□ -1.05
NCKAP1-208ENST00000495619 ZSWIM9Q86XI8 627 aa8.51□□□□□ -1.05
NCKAP1-208ENST00000495619 FAM168AQ92567 244 aa8.51□□□□□ -1.05
NCKAP1-208ENST00000495619 TCTN2Q96GX1 697 aa8.51□□□□□ -1.05
NCKAP1-208ENST00000495619 KIRREL1Q96J84 757 aa8.51□□□□□ -1.05
NCKAP1-208ENST00000495619 DNAJC25-GNG10A0A024R161 153 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 PAPLNO95428 1278 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 PRAMEF1O95521 474 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 HK2P52789 917 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 GNPTABQ3T906 1256 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 LINC00116Q8NCU8 138 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 PDZD8Q8NEN9 1154 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 ANAPC16Q96DE5 110 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 SHDQ96IW2 340 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 ADAMTS10Q9H324 1103 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 FAM53CQ9NYF3 392 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 TCFL5Q9UL49 500 aa8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 ZNF214Q9UL59 606 aaPredicted RBP8.5□□□□□ -1.05
NCKAP1-208ENST00000495619 TP53P04637 393 aaPredicted RBP8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 ARID5AQ03989 594 aa8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 CHRNEQ04844 493 aa8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 SNW1Q13573 536 aaKnown RBP8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 TMEM67Q5HYA8 995 aa8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 RALGPS1Q5JS13 557 aa8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 TDRD10Q5VZ19 366 aaKnown RBP8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 CWF19L1Q69YN2 538 aaKnown RBP8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.051e-7■□□□□ 8.9
NCKAP1-208ENST00000495619 GFOD1Q9NXC2 390 aa8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 ZMYM5Q9UJ78 669 aa8.49□□□□□ -1.05
NCKAP1-208ENST00000495619 FITM1A5D6W6 292 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 SYPP08247 313 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 RPL10P27635 214 aaKnown RBP8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 SLC7A5Q01650 507 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 ZYXQ15942 572 aaKnown RBP8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 TNNI3KQ59H18 835 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 USHBP1Q8N6Y0 703 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 ABHD4Q8TB40 342 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 MYLIPQ8WY64 445 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 GBP3Q9H0R5 595 aa8.48□□□□□ -1.05
NCKAP1-208ENST00000495619 A0A1W2PQH9 124 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 C9IYK1 514 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 GSNP06396 782 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 ITGA4P13612 1032 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 CASP7P55210 303 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 TEKQ02763 1124 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 HEATR6Q6AI08 1181 aaKnown RBP8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 WAPLQ7Z5K2 1190 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 LILRA2Q8N149 483 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 ANKS4BQ8N8V4 417 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 FOXP3Q9BZS1 431 aa8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
NCKAP1-208ENST00000495619 RBAK-RBAKDNI3L0D1 243 aa8.46□□□□□ -1.06
NCKAP1-208ENST00000495619 MEIS1O00470 390 aa8.46□□□□□ -1.06
NCKAP1-208ENST00000495619 GLI1P08151 1106 aa8.46□□□□□ -1.06
NCKAP1-208ENST00000495619 ZGLP1P0C6A0 271 aa8.46□□□□□ -1.06
NCKAP1-208ENST00000495619 NAT2P11245 290 aa8.46□□□□□ -1.06
NCKAP1-208ENST00000495619 AXDND1Q5T1B0 1012 aaPredicted RBP8.46□□□□□ -1.06
NCKAP1-208ENST00000495619 FAM86C1Q9NVL1 165 aa8.46□□□□□ -1.06
NCKAP1-208ENST00000495619 A0A087WZG4 1122 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 HPXP02790 462 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 CD247P20963 164 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 BMP8BP34820 402 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 NOP2P46087 812 aaKnown RBP8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 DCAF15Q66K64 600 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 MPZL3Q6UWV2 235 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 SLC43A3Q8NBI5 491 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 FMNL2Q96PY5 1086 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 GP6Q9HCN6 339 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 C19orf73Q9NVV2 129 aa8.45□□□□□ -1.06
NCKAP1-208ENST00000495619 R3HCC1Q9Y3T6 440 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms