RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 FGD1P98174 961 aa20.04■□□□□ 0.8
HDAC6-235ENST00000495515 COG2Q14746 738 aa20.04■□□□□ 0.8
HDAC6-235ENST00000495515 FAM83BQ5T0W9 1011 aa20.04■□□□□ 0.8
HDAC6-235ENST00000495515 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
HDAC6-235ENST00000495515 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
HDAC6-235ENST00000495515 FLOT1O75955 427 aa20.03■□□□□ 0.8
HDAC6-235ENST00000495515 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
HDAC6-235ENST00000495515 LIFRP42702 1097 aa20.03■□□□□ 0.8
HDAC6-235ENST00000495515 NFXL1Q6ZNB6 911 aa20.03■□□□□ 0.8
HDAC6-235ENST00000495515 IGDCC4Q8TDY8 1250 aa20.03■□□□□ 0.8
HDAC6-235ENST00000495515 MTMR7Q9Y216 660 aa20.03■□□□□ 0.8
HDAC6-235ENST00000495515 PTPRFP10586 1907 aa20.03■□□□□ 0.8
HDAC6-235ENST00000495515 MYPNQ86TC9 1320 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 CCDC69A6NI79 296 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 SH2B2O14492 632 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-235ENST00000495515 CAPN15O75808 1086 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 HERVK_113P62684 666 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.8
HDAC6-235ENST00000495515 CCDC96Q2M329 555 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 NOM1Q5C9Z4 860 aaKnown RBP20.02■□□□□ 0.8
HDAC6-235ENST00000495515 CATIPQ7Z7H3 387 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 CHURC1Q8WUH1 139 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 NUP88Q99567 741 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-235ENST00000495515 P2RX7Q99572 595 aaKnown RBP20.02■□□□□ 0.8
HDAC6-235ENST00000495515 FEM1BQ9UK73 627 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 CYP46A1Q9Y6A2 500 aa20.02■□□□□ 0.8
HDAC6-235ENST00000495515 HSPA8P11142 646 aaKnown RBP20.01■□□□□ 0.79
HDAC6-235ENST00000495515 RPS6KB1P23443 525 aa20.01■□□□□ 0.79
HDAC6-235ENST00000495515 LBX1P52954 281 aa20.01■□□□□ 0.79
HDAC6-235ENST00000495515 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
HDAC6-235ENST00000495515 FAM160B2Q86V87 743 aa20.01■□□□□ 0.79
HDAC6-235ENST00000495515 SLF1Q9BQI6 1058 aa20.01■□□□□ 0.79
HDAC6-235ENST00000495515 LY9Q9HBG7 655 aa20.01■□□□□ 0.79
HDAC6-235ENST00000495515 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
HDAC6-235ENST00000495515 TMEM232C9JQI7 657 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 GPR25O00155 361 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 PDHBP11177 359 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 DSG3P32926 999 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 STAT2P52630 851 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 IKQ13123 557 aaPredicted RBP20■□□□□ 0.79
HDAC6-235ENST00000495515 LBX2Q6XYB7 198 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 SYNE3Q6ZMZ3 975 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 RUFY3Q7L099 469 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 MB21D1Q8N884 522 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 PRPF38AQ8NAV1 312 aaKnown RBP20■□□□□ 0.79
HDAC6-235ENST00000495515 BACH2Q9BYV9 841 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 C22orf23Q9BZE7 217 aa20■□□□□ 0.79
HDAC6-235ENST00000495515 PLA2G6O60733 806 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 PARP1P09874 1014 aaKnown RBP19.99■□□□□ 0.79
HDAC6-235ENST00000495515 SNHG28P0DPA3 235 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 ASPRV1Q53RT3 343 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 SAMD1Q6SPF0 538 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-235ENST00000495515 C17orf99Q6UX52 265 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 KCTD1Q719H9 257 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 IL17RAQ96F46 866 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 LRRC2Q9BYS8 371 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 CPA4Q9UI42 421 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 TSKSQ9UJT2 592 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 PPP1R9AQ9ULJ8 1098 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 CTDP1Q9Y5B0 961 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-235ENST00000495515 SLC12A7Q9Y666 1083 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 ADGRA2Q96PE1 1338 aa19.99■□□□□ 0.79
HDAC6-235ENST00000495515 SPDYE16A6NNV3 312 aaPredicted RBP19.98■□□□□ 0.79
HDAC6-235ENST00000495515 DDAH1O94760 285 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 CALM1P0DP23 149 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 CALM2P0DP24 149 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 CALM3P0DP25 149 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 FDX1P10109 184 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 ZNF543Q08ER8 600 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 FAM110CQ1W6H9 321 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 SGMS1Q86VZ5 419 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 CHMP4CQ96CF2 233 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 RABGAP1Q9Y3P9 1069 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 MYH4Q9Y623 1939 aa19.98■□□□□ 0.79
HDAC6-235ENST00000495515 FKTNO75072 461 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 BCRP11274 1271 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 CPA1P15085 419 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 SP3Q02447 781 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 COL9A3Q14050 684 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-235ENST00000495515 KIF22Q14807 665 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 Q6ZUG5 572 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 ZNF654Q8IZM8 581 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 FBXL16Q8N461 479 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 ANKRD13CQ8N6S4 541 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 GPRC5AQ8NFJ5 357 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 KIFC2Q96AC6 838 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 MAP3K14Q99558 947 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 PAGR1Q9BTK6 254 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 SENP2Q9HC62 589 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 GPCPD1Q9NPB8 672 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 GPHNQ9NQX3 736 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-235ENST00000495515 FBXO28Q9NVF7 368 aa19.97■□□□□ 0.79
HDAC6-235ENST00000495515 FRMPD2Q68DX3 1309 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-235ENST00000495515 ZBED4O75132 1171 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 KIF5BP33176 963 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 RBM25P49756 843 aaKnown RBP19.96■□□□□ 0.79
HDAC6-235ENST00000495515 CCNA1P78396 465 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 TROAPQ12815 778 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms