RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 DSG3P32926 999 aa22.84■■□□□ 1.25
HDAC4-212ENST00000495497 GCLCP48506 637 aaPredicted RBP22.84■■□□□ 1.25
HDAC4-212ENST00000495497 SEC23AQ15436 765 aa22.84■■□□□ 1.25
HDAC4-212ENST00000495497 KCNB2Q92953 911 aa22.84■■□□□ 1.25
HDAC4-212ENST00000495497 SENP2Q9HC62 589 aa22.84■■□□□ 1.25
HDAC4-212ENST00000495497 CASP8AP2Q9UKL3 1982 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 ZKSCAN1P17029 563 aaPredicted RBP22.83■■□□□ 1.25
HDAC4-212ENST00000495497 CTGFP29279 349 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 SLC1A4P43007 532 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 Q3C1V9 767 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 TSGA10IPQ3SY00 556 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 COL13A1Q5TAT6 717 aaPredicted RBP22.83■■□□□ 1.25
HDAC4-212ENST00000495497 KCTD1Q719H9 257 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 ANKS1AQ92625 1134 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 ATG4CQ96DT6 458 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 GPHNQ9NQX3 736 aaPredicted RBP22.83■■□□□ 1.25
HDAC4-212ENST00000495497 SNX14Q9Y5W7 946 aa22.83■■□□□ 1.25
HDAC4-212ENST00000495497 TMEM232C9JQI7 657 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 PRC1O43663 620 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 LACTBP83111 547 aaPredicted RBP22.82■■□□□ 1.24
HDAC4-212ENST00000495497 FAM110CQ1W6H9 321 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 C8orf34Q49A92 452 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 IFIT1BQ5T764 474 aaKnown RBP22.82■■□□□ 1.24
HDAC4-212ENST00000495497 ERO1AQ96HE7 468 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 GMCL1Q96IK5 515 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 LRRC2Q9BYS8 371 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 KAT14Q9H8E8 782 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 HOXC10Q9NYD6 342 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 BTBD7Q9P203 1132 aa22.82■■□□□ 1.24
HDAC4-212ENST00000495497 CCDC96Q2M329 555 aa22.81■■□□□ 1.24
HDAC4-212ENST00000495497 PNMA1Q8ND90 353 aa22.81■■□□□ 1.24
HDAC4-212ENST00000495497 MORF4L1Q9UBU8 362 aa22.81■■□□□ 1.24
HDAC4-212ENST00000495497 PPP1R9AQ9ULJ8 1098 aa22.81■■□□□ 1.24
HDAC4-212ENST00000495497 FRMPD2Q68DX3 1309 aaPredicted RBP22.81■■□□□ 1.24
HDAC4-212ENST00000495497 CPA1P15085 419 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 MCM5P33992 734 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 TMEM67Q5HYA8 995 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 LBX2Q6XYB7 198 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 GPRC5AQ8NFJ5 357 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 IGDCC4Q8TDY8 1250 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 GTF3C2Q8WUA4 911 aaPredicted RBP22.8■■□□□ 1.24
HDAC4-212ENST00000495497 DCAF4Q8WV16 495 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 KIFC2Q96AC6 838 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 TCEANC2Q96MN5 208 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 SLF1Q9BQI6 1058 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 GPCPD1Q9NPB8 672 aa22.8■■□□□ 1.24
HDAC4-212ENST00000495497 ERICH2A1L162 156 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 EPB41L2O43491 1005 aaKnown RBP22.79■■□□□ 1.24
HDAC4-212ENST00000495497 PDHBP11177 359 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 PSMC4P43686 418 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 ERVK-9P63128 1117 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 ERVK-24P63145 666 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 KRT32Q14532 448 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 KIF22Q14807 665 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 WTAPQ15007 396 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 TTBK2Q6IQ55 1244 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 JAKMIP1Q96N16 626 aaKnown RBP22.79■■□□□ 1.24
HDAC4-212ENST00000495497 FEM1BQ9UK73 627 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 RABGAP1Q9Y3P9 1069 aa22.79■■□□□ 1.24
HDAC4-212ENST00000495497 GOLGA8HP0CJ92 632 aa22.78■■□□□ 1.24
HDAC4-212ENST00000495497 IKQ13123 557 aaPredicted RBP22.78■■□□□ 1.24
HDAC4-212ENST00000495497 SART3Q15020 963 aaKnown RBP22.78■■□□□ 1.24
HDAC4-212ENST00000495497 TRIM47Q96LD4 638 aa22.78■■□□□ 1.24
HDAC4-212ENST00000495497 LY9Q9HBG7 655 aa22.78■■□□□ 1.24
HDAC4-212ENST00000495497 TRIM17Q9Y577 477 aa22.78■■□□□ 1.24
HDAC4-212ENST00000495497 RLFQ13129 1914 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 VWA5AO00534 786 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 SH2B2O14492 632 aaPredicted RBP22.77■■□□□ 1.24
HDAC4-212ENST00000495497 FMNL1O95466 1100 aaPredicted RBP22.77■■□□□ 1.24
HDAC4-212ENST00000495497 SNHG28P0DPA3 235 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 SLC16A2P36021 539 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 EXOSC10Q01780 885 aaKnown RBP22.77■■□□□ 1.24
HDAC4-212ENST00000495497 OTOP1Q7RTM1 612 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 CTU1Q7Z7A3 348 aaKnown RBP22.77■■□□□ 1.24
HDAC4-212ENST00000495497 PRPF38AQ8NAV1 312 aaKnown RBP22.77■■□□□ 1.24
HDAC4-212ENST00000495497 PORCNQ9H237 461 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 EFCC1Q9HA90 598 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 ADAMTS5Q9UNA0 930 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 ZSWIM8A7E2V4 1837 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 MYPNQ86TC9 1320 aa22.77■■□□□ 1.24
HDAC4-212ENST00000495497 STAT2P52630 851 aa22.76■■□□□ 1.23
HDAC4-212ENST00000495497 SNAP25P60880 206 aa22.76■■□□□ 1.23
HDAC4-212ENST00000495497 PLS1Q14651 629 aa22.76■■□□□ 1.23
HDAC4-212ENST00000495497 TMEM132BQ14DG7 1078 aa22.76■■□□□ 1.23
HDAC4-212ENST00000495497 FCGRTP55899 365 aa22.75■■□□□ 1.23
HDAC4-212ENST00000495497 ZNF543Q08ER8 600 aa22.75■■□□□ 1.23
HDAC4-212ENST00000495497 DHX32Q7L7V1 743 aaKnown RBP22.75■■□□□ 1.23
HDAC4-212ENST00000495497 FAM160B2Q86V87 743 aa22.75■■□□□ 1.23
HDAC4-212ENST00000495497 REPS2Q8NFH8 660 aa22.75■■□□□ 1.23
HDAC4-212ENST00000495497 CHURC1Q8WUH1 139 aa22.75■■□□□ 1.23
HDAC4-212ENST00000495497 TMEM87BQ96K49 555 aa22.75■■□□□ 1.23
HDAC4-212ENST00000495497 CPVLQ9H3G5 476 aa22.75■■□□□ 1.23
HDAC4-212ENST00000495497 NFXL1Q6ZNB6 911 aa22.74■■□□□ 1.23
HDAC4-212ENST00000495497 MB21D1Q8N884 522 aa22.74■■□□□ 1.23
HDAC4-212ENST00000495497 MOV10L1Q9BXT6 1211 aaKnown RBP22.74■■□□□ 1.23
HDAC4-212ENST00000495497 UBA5Q9GZZ9 404 aa22.74■■□□□ 1.23
HDAC4-212ENST00000495497 SPATC1LQ9H0A9 340 aa22.74■■□□□ 1.23
HDAC4-212ENST00000495497 PRR12Q9ULL5 1215 aa22.74■■□□□ 1.23
HDAC4-212ENST00000495497 TNPO2O14787 897 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms