RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 AKR1A1P14550 325 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 KCNA5P22460 613 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 RABL6Q3YEC7 729 aaPredicted RBP18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 IER5LQ5T953 404 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 PTCRAQ6ISU1 281 aaPredicted RBP18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 FAM86C1Q9NVL1 165 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 CHD6Q8TD26 2715 aa18.1■□□□□ 0.49
CHMP2B-205ENST00000494980 DMXL1Q9Y485 3027 aa18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 MYADML2A6NDP7 307 aa18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 LPXNO60711 386 aa18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 NBPF7P0C2Y1 421 aaPredicted RBP18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 TAP1Q03518 808 aa18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 KLHDC9Q8NEP7 349 aa18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 HIPK3Q9H422 1215 aa18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 GINM1Q9NU53 330 aa18.09■□□□□ 0.49
CHMP2B-205ENST00000494980 KMT2EQ8IZD2 1858 aa18.08■□□□□ 0.49
CHMP2B-205ENST00000494980 ZNF536O15090 1300 aa18.08■□□□□ 0.49
CHMP2B-205ENST00000494980 ARVCFO00192 962 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 CCL23P55773 120 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 MECOMQ03112 1051 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 TCF15Q12870 199 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 CCSAPQ6IQ19 270 aaPredicted RBP18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 SHCBP1Q8NEM2 672 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 ZNF384Q8TF68 577 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 VTI1AQ96AJ9 217 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 SPATC1LQ9H0A9 340 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 DNAH14Q0VDD8 3507 aa18.08■□□□□ 0.48
CHMP2B-205ENST00000494980 PLXNA3P51805 1871 aa18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 FOCADQ5VW36 1801 aa18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 ZNF865P0CJ78 1059 aaPredicted RBP18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 SPRED2Q7Z698 418 aa18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 TEX11Q8IYF3 940 aa18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 TRIM34Q9BYJ4 488 aa18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 CFAP47Q6ZTR5 3102 aa18.07■□□□□ 0.48
CHMP2B-205ENST00000494980 SCN5AQ14524 2016 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 ACACBO00763 2458 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 CD4P01730 458 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 IRX5P78411 483 aaPredicted RBP18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 RASGRF1Q13972 1273 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 ATP2B3Q16720 1220 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 SPTY2D1Q68D10 685 aaPredicted RBP18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 ABRAQ8N0Z2 381 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 CRACR2BQ8N4Y2 399 aaPredicted RBP18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 CDCA7LQ96GN5 454 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 TINF2Q9BSI4 451 aa18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 RPAP3Q9H6T3 665 aaPredicted RBP18.06■□□□□ 0.48
CHMP2B-205ENST00000494980 ZNF292O60281 2723 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 GRXCR2A6NFK2 248 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 EYA2O00167 538 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 MAP4K4O95819 1239 aaPredicted RBP18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 GH2P01242 217 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 USP14P54578 494 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 TTLL4Q14679 1199 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 SLC4A10Q6U841 1118 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 NCAPG2Q86XI2 1143 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 GDPD5Q8WTR4 605 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 SRCIN1Q9C0H9 1055 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 WNT8AQ9H1J5 351 aa18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 DHX36Q9H2U1 1008 aaKnown RBP18.05■□□□□ 0.48
CHMP2B-205ENST00000494980 ATRXP46100 2492 aa18.04■□□□□ 0.48
CHMP2B-205ENST00000494980 ASGR1P07306 291 aa18.04■□□□□ 0.48
CHMP2B-205ENST00000494980 RPUSD2Q8IZ73 545 aaKnown RBP18.04■□□□□ 0.48
CHMP2B-205ENST00000494980 VWCEQ96DN2 955 aa18.04■□□□□ 0.48
CHMP2B-205ENST00000494980 MROH8Q9H579 483 aa18.04■□□□□ 0.48
CHMP2B-205ENST00000494980 FCER1AP12319 257 aa18.03■□□□□ 0.48
CHMP2B-205ENST00000494980 ZP2Q05996 745 aa18.03■□□□□ 0.48
CHMP2B-205ENST00000494980 PLS1Q14651 629 aa18.03■□□□□ 0.48
CHMP2B-205ENST00000494980 ERICH6Q7L0X2 663 aa18.03■□□□□ 0.48
CHMP2B-205ENST00000494980 METTL16Q86W50 562 aaKnown RBP18.03■□□□□ 0.48
CHMP2B-205ENST00000494980 PRRX2Q99811 253 aa18.03■□□□□ 0.48
CHMP2B-205ENST00000494980 KIAA1683Q9H0B3 1180 aa18.03■□□□□ 0.48
CHMP2B-205ENST00000494980 COL11A1P12107 1806 aaPredicted RBP18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 PTPRSQ13332 1948 aa18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 PGK2P07205 417 aa18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 C6orf222P0C671 652 aaPredicted RBP18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 CST5P28325 142 aaPredicted RBP18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 RALBP1Q15311 655 aa18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 CCDC102BQ68D86 513 aa18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 PCSK9Q8NBP7 692 aaKnown RBP18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 ACER1Q8TDN7 264 aa18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 NOC4LQ9BVI4 516 aaKnown RBP18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 LMCD1Q9NZU5 365 aa18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
CHMP2B-205ENST00000494980 MCM3APO60318 1980 aa18.02■□□□□ 0.47
CHMP2B-205ENST00000494980 ADORA1P30542 326 aa18.01■□□□□ 0.47
CHMP2B-205ENST00000494980 ATG9AQ7Z3C6 839 aa18.01■□□□□ 0.47
CHMP2B-205ENST00000494980 FOXP4Q8IVH2 680 aaPredicted RBP18.01■□□□□ 0.47
CHMP2B-205ENST00000494980 SCLYQ96I15 445 aa18.01■□□□□ 0.47
CHMP2B-205ENST00000494980 PDS5AQ29RF7 1337 aaKnown RBP18■□□□□ 0.47
CHMP2B-205ENST00000494980 PARP14Q460N5 1801 aa18■□□□□ 0.47
CHMP2B-205ENST00000494980 GSTO1P78417 241 aa18■□□□□ 0.47
CHMP2B-205ENST00000494980 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
CHMP2B-205ENST00000494980 MAPKAPK5Q8IW41 473 aa18■□□□□ 0.47
CHMP2B-205ENST00000494980 SLC9A7Q96T83 725 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms