RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ADM5C9JUS6 153 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 NDUFB10O96000 172 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 SCG2P13521 617 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
PKP4-215ENST00000494945 INPP5BP32019 993 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 NF2P35240 595 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 SLC1A4P43007 532 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 FOSBP53539 338 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 CCDC96Q2M329 555 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 EAPPQ56P03 285 aaPredicted RBP12.75□□□□□ -0.37
PKP4-215ENST00000494945 NOL9Q5SY16 702 aaKnown RBP12.75□□□□□ -0.37
PKP4-215ENST00000494945 PRAMEF18Q5VWM3 479 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 FRMPD2Q68DX3 1309 aaPredicted RBP12.75□□□□□ -0.37
PKP4-215ENST00000494945 KRT40Q6A162 431 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 RASGRP2Q7LDG7 609 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
PKP4-215ENST00000494945 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 CYTH3O43739 400 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 PPP1R12BO60237 982 aaPredicted RBP12.74□□□□□ -0.37
PKP4-215ENST00000494945 BMP3P12645 472 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 PTMSP20962 102 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 MCM4P33991 863 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 RESTQ13127 1097 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKP4-215ENST00000494945 ACER1Q8TDN7 264 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
PKP4-215ENST00000494945 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 WDR18Q9BV38 432 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 VCPKMTQ9H867 229 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 AS3MTQ9HBK9 375 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 GPCPD1Q9NPB8 672 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 SH3GLB2Q9NR46 395 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 PICK1Q9NRD5 415 aa12.74□□□□□ -0.37
PKP4-215ENST00000494945 UBE2Q2LH0YL09 131 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 hCG_1984214I3L0E3 225 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 RAD21O60216 631 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
PKP4-215ENST00000494945 MMP1P03956 469 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 ECE1P42892 770 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
PKP4-215ENST00000494945 SLC35G1Q2M3R5 365 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 MCTP1Q6DN14 999 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 OTUD7BQ6GQQ9 843 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 KCTD1Q719H9 257 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
PKP4-215ENST00000494945 ZNF713Q8N859 430 aaPredicted RBP12.73□□□□□ -0.37
PKP4-215ENST00000494945 SEC63Q9UGP8 760 aaKnown RBP12.73□□□□□ -0.37
PKP4-215ENST00000494945 A0A0G2JMZ2 1700 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 IREB2P48200 963 aaKnown RBP12.72□□□□□ -0.37
PKP4-215ENST00000494945 MAP3K9P80192 1104 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 KIF23Q02241 960 aaPredicted RBP12.72□□□□□ -0.37
PKP4-215ENST00000494945 ATL3Q6DD88 541 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 BTNL9Q6UXG8 535 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 CCDC148Q8NFR7 591 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 LPAR1Q92633 364 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 ZKSCAN4Q969J2 545 aaPredicted RBP12.72□□□□□ -0.37
PKP4-215ENST00000494945 MTMR8Q96EF0 704 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 FEZ1Q99689 392 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 PHF20Q9BVI0 1012 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 KIAA1683Q9H0B3 1180 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 GJB4Q9NTQ9 266 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 VPS54Q9P1Q0 977 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.72□□□□□ -0.37
PKP4-215ENST00000494945 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
PKP4-215ENST00000494945 USP17L10C9JJH3 530 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 PLA2G6O60733 806 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 PTPRAP18433 802 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 U2AF2P26368 475 aaKnown RBP eCLIP12.71□□□□□ -0.37
PKP4-215ENST00000494945 CALML3P27482 149 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 USP14P54578 494 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 KRT85P78386 507 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 GALNT17Q6IS24 598 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 LDHDQ86WU2 507 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 ADGRF4Q8IZF3 695 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 CCDC12Q8WUD4 166 aaPredicted RBP12.71□□□□□ -0.37
PKP4-215ENST00000494945 PIGSQ96S52 555 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 GLIS2Q9BZE0 524 aaPredicted RBP12.71□□□□□ -0.37
PKP4-215ENST00000494945 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.37
PKP4-215ENST00000494945 CPVLQ9H3G5 476 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 JMJD4Q9H9V9 463 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 BARHL2Q9NY43 387 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 ISY1Q9ULR0 285 aaKnown RBP12.71□□□□□ -0.37
PKP4-215ENST00000494945 CSADQ9Y600 493 aa12.71□□□□□ -0.37
PKP4-215ENST00000494945 PNMA6FA0A0J9YX94 578 aa12.7□□□□□ -0.38
PKP4-215ENST00000494945 WDR46O15213 610 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms