RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 TRIM32Q13049 653 aa21.35■■□□□ 1.01
COL20A1-207ENST00000494913 CWC27Q6UX04 472 aaKnown RBP21.35■■□□□ 1.01
COL20A1-207ENST00000494913 U2AF1L4Q8WU68 220 aaKnown RBP21.35■■□□□ 1.01
COL20A1-207ENST00000494913 TRIB2Q92519 343 aa21.35■■□□□ 1.01
COL20A1-207ENST00000494913 SHISA4Q96DD7 197 aa21.35■■□□□ 1.01
COL20A1-207ENST00000494913 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL20A1-207ENST00000494913 SLC15A5A6NIM6 579 aa21.34■■□□□ 1.01
COL20A1-207ENST00000494913 NDUFB10O96000 172 aa21.34■■□□□ 1.01
COL20A1-207ENST00000494913 PTPREP23469 700 aa21.34■■□□□ 1.01
COL20A1-207ENST00000494913 MFAP1P55081 439 aaKnown RBP21.34■■□□□ 1.01
COL20A1-207ENST00000494913 MAP2K5Q13163 448 aa21.34■■□□□ 1.01
COL20A1-207ENST00000494913 DEFB118Q96PH6 123 aa21.34■■□□□ 1.01
COL20A1-207ENST00000494913 TACC3Q9Y6A5 838 aa21.34■■□□□ 1.01
COL20A1-207ENST00000494913 PLIN4Q96Q06 1357 aa21.34■■□□□ 1.01
COL20A1-207ENST00000494913 TSPY2A6NKD2 308 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 HIP1O00291 1037 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 RANBP6O60518 1105 aaKnown RBP21.33■■□□□ 1.01
COL20A1-207ENST00000494913 SGPL1O95470 568 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 ERCC3P19447 782 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 CCL14Q16627 93 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 TRMT44Q8IYL2 757 aaKnown RBP21.33■■□□□ 1.01
COL20A1-207ENST00000494913 LRRC47Q8N1G4 583 aaKnown RBP21.33■■□□□ 1.01
COL20A1-207ENST00000494913 APBA2Q99767 749 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 PPP1R9AQ9ULJ8 1098 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 ADAMTS5Q9UNA0 930 aa21.33■■□□□ 1.01
COL20A1-207ENST00000494913 ZKSCAN1P17029 563 aaPredicted RBP21.32■■□□□ 1
COL20A1-207ENST00000494913 TMEM132BQ14DG7 1078 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 PAK6Q9NQU5 681 aaPredicted RBP21.32■■□□□ 1
COL20A1-207ENST00000494913 TOMM22Q9NS69 142 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 RPTORQ8N122 1335 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 VWA5AO00534 786 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 TFRCP02786 760 aaKnown RBP21.32■■□□□ 1
COL20A1-207ENST00000494913 HAND2P61296 217 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 GRB14Q14449 540 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 TTC22Q5TAA0 569 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 NCAPG2Q86XI2 1143 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 SHCBP1Q8NEM2 672 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 SLF1Q9BQI6 1058 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.32■■□□□ 1
COL20A1-207ENST00000494913 HMX1Q9NP08 348 aaPredicted RBP21.32■■□□□ 1
COL20A1-207ENST00000494913 SYNPO2Q9UMS6 1093 aa21.32■■□□□ 1
COL20A1-207ENST00000494913 ZMYM6O95789 1325 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 MYH4Q9Y623 1939 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 STRNO43815 780 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 ORC4O43929 436 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 NMT2O60551 498 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 FGRP09769 529 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 PRKAR2AP13861 404 aaKnown RBP21.31■■□□□ 1
COL20A1-207ENST00000494913 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
COL20A1-207ENST00000494913 GMCL1P1Q8NEA9 526 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 MROH8Q9H579 483 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 IL17RBQ9NRM6 502 aa21.31■■□□□ 1
COL20A1-207ENST00000494913 PPP4R3BQ5MIZ7 849 aa21.3■■□□□ 1
COL20A1-207ENST00000494913 SLFN13Q68D06 897 aa21.3■■□□□ 1
COL20A1-207ENST00000494913 STX8Q9UNK0 236 aa21.3■■□□□ 1
COL20A1-207ENST00000494913 A0A0G2JMZ2 1700 aa21.29■■□□□ 1
COL20A1-207ENST00000494913 PARP14Q460N5 1801 aa21.29■■□□□ 1
COL20A1-207ENST00000494913 GSPT1P15170 499 aaKnown RBP21.29■■□□□ 1
COL20A1-207ENST00000494913 STAT3P40763 770 aa21.29■■□□□ 1
COL20A1-207ENST00000494913 CACNB2Q08289 660 aaPredicted RBP21.29■■□□□ 1
COL20A1-207ENST00000494913 MAP3K21Q5TCX8 1036 aa21.29■■□□□ 1
COL20A1-207ENST00000494913 DPP9Q86TI2 863 aa21.29■■□□□ 1
COL20A1-207ENST00000494913 PRPF38AQ8NAV1 312 aaKnown RBP21.29■■□□□ 1
COL20A1-207ENST00000494913 SLC25A27O95847 323 aa21.28■■□□□ 1
COL20A1-207ENST00000494913 HOXC6P09630 235 aa21.28■■□□□ 1
COL20A1-207ENST00000494913 ADORA2AP29274 412 aa21.28■■□□□ 1
COL20A1-207ENST00000494913 NPLOC4Q8TAT6 608 aa21.28■■□□□ 1
COL20A1-207ENST00000494913 CHMP4CQ96CF2 233 aa21.28■■□□□ 1
COL20A1-207ENST00000494913 FLRT1Q9NZU1 646 aa21.28■■□□□ 1
COL20A1-207ENST00000494913 FEM1BQ9UK73 627 aa21.28■■□□□ 1
COL20A1-207ENST00000494913 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
COL20A1-207ENST00000494913 BMP3P12645 472 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 MFSD14CQ5VZR4 134 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 MFSD6Q6ZSS7 791 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 RIOX2Q8IUF8 465 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 REPS2Q8NFH8 660 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 KIFC2Q96AC6 838 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 NBPF3Q9H094 633 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 CRISPLD2Q9H0B8 497 aa21.27■■□□□ 1
COL20A1-207ENST00000494913 ZNF214Q9UL59 606 aaPredicted RBP21.27■■□□□ 1
COL20A1-207ENST00000494913 ISY1Q9ULR0 285 aaKnown RBP21.27■■□□□ 1
COL20A1-207ENST00000494913 FARP2O94887 1054 aaPredicted RBP21.26■□□□□ 0.99
COL20A1-207ENST00000494913 FCER1AP12319 257 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 MCCP23508 829 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 AKNAD1Q5T1N1 836 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 PRPF38BQ5VTL8 546 aaKnown RBP21.26■□□□□ 0.99
COL20A1-207ENST00000494913 UBE2Q1Q7Z7E8 422 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 CTDP1Q9Y5B0 961 aaPredicted RBP21.26■□□□□ 0.99
COL20A1-207ENST00000494913 COL11A1P12107 1806 aaPredicted RBP21.26■□□□□ 0.99
COL20A1-207ENST00000494913 ZNF213O14771 459 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 COBLO75128 1261 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 ZBED4O75132 1171 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 CAPN2P17655 700 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 SLC1A4P43007 532 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 TBC1D10CQ8IV04 446 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 ABRAQ8N0Z2 381 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 STAG1Q8WVM7 1258 aa21.26■□□□□ 0.99
COL20A1-207ENST00000494913 TMEM232C9JQI7 657 aa21.25■□□□□ 0.99
COL20A1-207ENST00000494913 CCND3P30281 292 aaPredicted RBP21.25■□□□□ 0.99
COL20A1-207ENST00000494913 GMCL1Q96IK5 515 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms