RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
LIME1-209ENST00000494776 GABRQQ9UN88 632 aa18.8■□□□□ 0.6
LIME1-209ENST00000494776 MTMR7Q9Y216 660 aa18.8■□□□□ 0.6
LIME1-209ENST00000494776 CNMDO75829 334 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 FLT3LGP49771 235 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 POTEEQ6S8J3 1075 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 CHMP4CQ96CF2 233 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 KRT23Q9C075 422 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 PORCNQ9H237 461 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 CNNM2Q9H8M5 875 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 FBXO28Q9NVF7 368 aa18.79■□□□□ 0.6
LIME1-209ENST00000494776 BIN2Q9UBW5 565 aaPredicted RBP18.79■□□□□ 0.6
LIME1-209ENST00000494776 CTDP1Q9Y5B0 961 aaPredicted RBP18.79■□□□□ 0.6
LIME1-209ENST00000494776 MGAMO43451 1857 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 B4E1Z4 1266 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 KDM4AO75164 1064 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 BMP3P12645 472 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 NT5C2P49902 561 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 TRDNQ13061 729 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 IQCA1Q86XH1 822 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 SH3TC2Q8TF17 1288 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 SLF1Q9BQI6 1058 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 PPP1R9AQ9ULJ8 1098 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 MYH4Q9Y623 1939 aa18.78■□□□□ 0.6
LIME1-209ENST00000494776 CDC45O75419 566 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 TOP1P11387 765 aaKnown RBP18.77■□□□□ 0.6
LIME1-209ENST00000494776 MCCP23508 829 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 GRK4P32298 578 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 SLC1A4P43007 532 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 IKQ13123 557 aaPredicted RBP18.77■□□□□ 0.6
LIME1-209ENST00000494776 CCDC178Q5BJE1 867 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 GPR142Q7Z601 462 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 PLEKHH3Q7Z736 793 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 NUDT12Q9BQG2 462 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 ZKSCAN3Q9BRR0 538 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 SPATC1LQ9H0A9 340 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 FEM1BQ9UK73 627 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 IVNS1ABPQ9Y6Y0 642 aa18.77■□□□□ 0.6
LIME1-209ENST00000494776 ADCY3O60266 1144 aa18.76■□□□□ 0.59
LIME1-209ENST00000494776 MYCP01106 439 aaPredicted RBP18.76■□□□□ 0.59
LIME1-209ENST00000494776 PRPF38AQ8NAV1 312 aaKnown RBP18.76■□□□□ 0.59
LIME1-209ENST00000494776 SLAIN1Q8ND83 568 aa18.76■□□□□ 0.59
LIME1-209ENST00000494776 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
LIME1-209ENST00000494776 KIFC2Q96AC6 838 aa18.76■□□□□ 0.59
LIME1-209ENST00000494776 ARMC5Q96C12 935 aa18.76■□□□□ 0.59
LIME1-209ENST00000494776 TTC14Q96N46 770 aa18.76■□□□□ 0.59
LIME1-209ENST00000494776 ANO2Q9NQ90 1003 aa18.76■□□□□ 0.59
LIME1-209ENST00000494776 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
LIME1-209ENST00000494776 LAMA4Q16363 1823 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 TMEM232C9JQI7 657 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 VWA5AO00534 786 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 ZBED4O75132 1171 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 CYP21A2P08686 494 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 SOX10P56693 466 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 IRF5Q13568 498 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 NCAPG2Q86XI2 1143 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 CHURC1Q8WUH1 139 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 SOCS4Q8WXH5 440 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 GMCL1Q96IK5 515 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 TMEM47Q9BQJ4 181 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 UBAC1Q9BSL1 405 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 MOV10L1Q9BXT6 1211 aaKnown RBP18.75■□□□□ 0.59
LIME1-209ENST00000494776 ZSWIM5Q9P217 1185 aa18.75■□□□□ 0.59
LIME1-209ENST00000494776 CYP2B6P20813 491 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 NOVP48745 357 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 STAT2P52630 851 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 UBXN2AP68543 259 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 TMEM132BQ14DG7 1078 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 RCSD1Q6JBY9 416 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 KCTD1Q719H9 257 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 RALYLQ86SE5 291 aaKnown RBP18.74■□□□□ 0.59
LIME1-209ENST00000494776 NKX2-3Q8TAU0 364 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 ZNF333Q96JL9 665 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 ZSCAN10Q96SZ4 725 aaPredicted RBP18.74■□□□□ 0.59
LIME1-209ENST00000494776 TMEM106CQ9BVX2 250 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 GJD2Q9UKL4 321 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 ADAMTS5Q9UNA0 930 aa18.74■□□□□ 0.59
LIME1-209ENST00000494776 ELNP15502 786 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 ERCC3P19447 782 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 SLC4A3P48751 1232 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 FAM160B2Q86V87 743 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 DGKHQ86XP1 1220 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 SHCBP1Q8NEM2 672 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 PXYLP1Q8TE99 480 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 DCAF4Q8WV16 495 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 LSG1Q9H089 658 aaKnown RBP18.73■□□□□ 0.59
LIME1-209ENST00000494776 MROH8Q9H579 483 aa18.73■□□□□ 0.59
LIME1-209ENST00000494776 E7EWF7 191 aa18.72■□□□□ 0.59
LIME1-209ENST00000494776 SLC25A27O95847 323 aa18.72■□□□□ 0.59
LIME1-209ENST00000494776 PTPREP23469 700 aa18.72■□□□□ 0.59
LIME1-209ENST00000494776 STAT3P40763 770 aa18.72■□□□□ 0.59
LIME1-209ENST00000494776 RGS2P41220 211 aa18.72■□□□□ 0.59
LIME1-209ENST00000494776 NCOA7Q8NI08 942 aa18.72■□□□□ 0.59
LIME1-209ENST00000494776 KAT14Q9H8E8 782 aa18.72■□□□□ 0.59
LIME1-209ENST00000494776 RLFQ13129 1914 aa18.71■□□□□ 0.59
LIME1-209ENST00000494776 SLC15A5A6NIM6 579 aa18.71■□□□□ 0.59
LIME1-209ENST00000494776 STRNO43815 780 aa18.71■□□□□ 0.59
LIME1-209ENST00000494776 MORN1Q5T089 497 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms