RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CACNB3P54284 484 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 JAG1P78504 1218 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 RRP1BQ14684 758 aaKnown RBP7.85□□□□□ -1.15
MSH5-217ENST00000494458 CERKLQ49MI3 558 aaPredicted RBP7.85□□□□□ -1.15
MSH5-217ENST00000494458 ASPRV1Q53RT3 343 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
MSH5-217ENST00000494458 ADALQ6DHV7 355 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 GALNT17Q6IS24 598 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 TMEM179Q6ZVK1 233 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 CMTR1Q8N1G2 835 aaKnown RBP7.85□□□□□ -1.15
MSH5-217ENST00000494458 ENGASEQ8NFI3 743 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 SPATA32Q96LK8 384 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 TEPSINQ96N21 525 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 MYOZ2Q9NPC6 264 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 GINM1Q9NU53 330 aa7.85□□□□□ -1.15
MSH5-217ENST00000494458 ESYT2A0FGR8 921 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 PHF20L1A8MW92 1017 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 KLRF2D3W0D1 207 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 hCG_1984214I3L0E3 225 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 FIBPO43427 364 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 LETM1O95202 739 aaPredicted RBP7.84□□□□□ -1.15
MSH5-217ENST00000494458 PARP1P09874 1014 aaKnown RBP7.84□□□□□ -1.15
MSH5-217ENST00000494458 XBP1P17861 261 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 RBM5P52756 815 aaKnown RBP eCLIP7.84□□□□□ -1.15
MSH5-217ENST00000494458 GUCY1B3Q02153 619 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 ZNF543Q08ER8 600 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 TCP10Q12799 353 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 SNW1Q13573 536 aaKnown RBP7.84□□□□□ -1.15
MSH5-217ENST00000494458 SLC4A8Q2Y0W8 1093 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 NBPF9Q3BBW0 867 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 ZSCAN23Q3MJ62 389 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 GPATCH4Q5T3I0 446 aaKnown RBP7.84□□□□□ -1.15
MSH5-217ENST00000494458 ANO1Q5XXA6 986 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 BTNL9Q6UXG8 535 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 GAS2L3Q86XJ1 694 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 TEX2Q8IWB9 1127 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 DIS3L2Q8IYB7 885 aaKnown RBP7.84□□□□□ -1.15
MSH5-217ENST00000494458 ZNF713Q8N859 430 aaPredicted RBP7.84□□□□□ -1.15
MSH5-217ENST00000494458 GMCL1P1Q8NEA9 526 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 KCNG4Q8TDN1 519 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 SYT17Q9BSW7 474 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 FUCA2Q9BTY2 467 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 ZMYND12Q9H0C1 365 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 BARHL2Q9NY43 387 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 STX8Q9UNK0 236 aa7.84□□□□□ -1.15
MSH5-217ENST00000494458 MYH15Q9Y2K3 1946 aa7.84□□□□□ -1.16
MSH5-217ENST00000494458 USP17L5A8MUK1 530 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 STXBP3O00186 592 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 PLA2G6O60733 806 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 EGFRP00533 1210 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 SLURP2P0DP57 97 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 EEF2P13639 858 aaKnown RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 LMNB1P20700 586 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 CMA1P23946 247 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 TRAPPC10P48553 1259 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 GMPSP49915 693 aaPredicted RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 EIF6P56537 245 aaKnown RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 AKAP17AQ02040 695 aaKnown RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 RASSF7Q02833 373 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 TRIM29Q14134 588 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 SAFBQ15424 915 aaKnown RBP eCLIP7.83□□□□□ -1.16
MSH5-217ENST00000494458 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 RILPL1Q5EBL4 403 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 TYW1BQ6NUM6 668 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 CAVIN1Q6NZI2 390 aaKnown RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 ELOA2Q8IYF1 753 aaPredicted RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 GPC2Q8N158 579 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 CCDC82Q8N4S0 544 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 OXER1Q8TDS5 423 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 DCAF4Q8WV16 495 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 GMCL1Q96IK5 515 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 CSRNP1Q96S65 589 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 FHDC1Q9C0D6 1143 aaPredicted RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 TMOD2Q9NZR1 351 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 CLIP2Q9UDT6 1046 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 CNOT7Q9UIV1 285 aaKnown RBP7.83□□□□□ -1.16
MSH5-217ENST00000494458 ZNF112Q9UJU3 913 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 PCDHA7Q9UN72 937 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 KCNJ14Q9UNX9 436 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 CLIC4Q9Y696 253 aa7.83□□□□□ -1.16
MSH5-217ENST00000494458 DICER1Q9UPY3 1922 aaKnown RBP7.82□□□□□ -1.16
MSH5-217ENST00000494458 SHTN1A0MZ66 631 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 SPTLC2O15270 562 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 MYO1BO43795 1136 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 LIG1P18858 919 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 PTPREP23469 700 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 CALML3P27482 149 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 NR5A1Q13285 461 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 SEPT2Q15019 361 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 SF3A1Q15459 793 aaKnown RBP7.82□□□□□ -1.16
MSH5-217ENST00000494458 ABCB5Q2M3G0 1257 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 EARS2Q5JPH6 523 aaKnown RBP7.82□□□□□ -1.16
MSH5-217ENST00000494458 CCDC183Q5T5S1 534 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 LRSAM1Q6UWE0 723 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 SYAP1Q96A49 352 aaPredicted RBP7.82□□□□□ -1.16
MSH5-217ENST00000494458 FTOQ9C0B1 505 aaKnown RBP eCLIP7.82□□□□□ -1.16
MSH5-217ENST00000494458 JMJD4Q9H9V9 463 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms