RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 ZSCAN30Q86W11 494 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 NAXEQ8NCW5 288 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 GIMAP8Q8ND71 665 aaPredicted RBP8.16□□□□□ -1.1
SNX13-210ENST00000494402 RETREG1Q9H6L5 497 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 C11orf16Q9NQ32 467 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 CRTAC1Q9NQ79 661 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 LTBP3Q9NS15 1303 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 RASSF1Q9NS23 344 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 TMEM39AQ9NV64 488 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 PCDHB10Q9UN67 800 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 PCDHGB3Q9Y5G1 929 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 DDX3YO15523 660 aaKnown RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 CBFA2T2O43439 604 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 MT-CO1P00395 513 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 JMJD7P0C870 316 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 HSD3B1P14060 373 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 HSPA6P17066 643 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 TATP17735 454 aaPredicted RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 POLD1P28340 1107 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 IARSP41252 1262 aaKnown RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 ALDH5A1P51649 535 aaPredicted RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 ZNF143P52747 638 aaPredicted RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 PPP2R3AQ06190 1150 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 TRIM32Q13049 653 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 MLECQ14165 292 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 ZNF460Q14592 562 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 ZYXQ15942 572 aaKnown RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 CFAP100Q494V2 611 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 TBC1D10BQ4KMP7 808 aaPredicted RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 GNASQ5JWF2 1037 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 WDR45BQ5MNZ6 344 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 PLA2G2CQ5R387 149 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 INTS3Q68E01 1043 aaKnown RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 HEATR6Q6AI08 1181 aaKnown RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 IGF2-ASQ6U949 168 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 LDHAL6AQ6ZMR3 332 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 UBE2R2Q712K3 238 aaPredicted RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 PNMA8AQ86V59 439 aaPredicted RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 SKAP1Q86WV1 359 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 FAM43AQ8N2R8 423 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 HSPBAP1Q96EW2 488 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 PPM1MQ96MI6 270 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 NAA15Q9BXJ9 866 aaKnown RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 EFCC1Q9HA90 598 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 NMRK2Q9NPI5 230 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 CWC25Q9NXE8 425 aaPredicted RBP8.15□□□□□ -1.1
SNX13-210ENST00000494402 NDOR1Q9UHB4 597 aa8.15□□□□□ -1.1
SNX13-210ENST00000494402 hCG_1642624A0A1W2PR95 340 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 MEN1O00255 615 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 MAPK9P45984 424 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 GRIA4P48058 902 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 RXRGP48443 463 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 RPIAP49247 311 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 TRIM14Q14142 442 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 INAVAQ3KP66 663 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 CCDC92Q53HC0 331 aaPredicted RBP8.14□□□□□ -1.11
SNX13-210ENST00000494402 DUSP27Q5VZP5 1158 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 CHST15Q7LFX5 561 aaPredicted RBP8.14□□□□□ -1.11
SNX13-210ENST00000494402 SAPCD2Q86UD0 394 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 KLHL6Q8WZ60 621 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 ZKSCAN3Q9BRR0 538 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 KIAA1586Q9HCI6 787 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 LRRC4BQ9NT99 713 aa8.14□□□□□ -1.11
SNX13-210ENST00000494402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.14□□□□□ -1.11
SNX13-210ENST00000494402 TLR5O60602 858 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 FGFR1P11362 822 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 RHCEP18577 417 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 GRK6P43250 576 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 RHDQ02161 417 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 SART3Q15020 963 aaKnown RBP8.13□□□□□ -1.11
SNX13-210ENST00000494402 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 ANKLE2Q86XL3 938 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 OR8H2Q8N162 312 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 SECISBP2LQ93073 1101 aaKnown RBP8.13□□□□□ -1.11
SNX13-210ENST00000494402 OSMRQ99650 979 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 EIF2AK1Q9BQI3 630 aaKnown RBP8.13□□□□□ -1.11
SNX13-210ENST00000494402 ISCA1Q9BUE6 129 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 AAASQ9NRG9 546 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 PTPN22Q9Y2R2 807 aa8.13□□□□□ -1.11
SNX13-210ENST00000494402 ITIH6Q6UXX5 1313 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 A6NCN8 305 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 B4E1Z4 1266 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 K7ENM7 598 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 M0R2C6 588 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 FZD9O00144 591 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 CD2BP2O95400 341 aaKnown RBP8.12□□□□□ -1.11
SNX13-210ENST00000494402 IL33O95760 270 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 ACRP10323 421 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 BMP6P22004 513 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 ERVK-21P61565 698 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 GABREP78334 506 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 KRT85P78386 507 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 NR5A1Q13285 461 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 KLF1Q13351 362 aaPredicted RBP8.12□□□□□ -1.11
SNX13-210ENST00000494402 TAF11Q15544 211 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms