RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 RAD21O60216 631 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 COBLO75128 1261 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 NDUFB10O96000 172 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 ADORA2AP29274 412 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 CYP2C19P33261 490 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 KLRC3Q07444 240 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 VPS53Q5VIR6 699 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 NCAPG2Q86XI2 1143 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 SMC5Q8IY18 1101 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 ZNF444Q8N0Y2 327 aaPredicted RBP11.64□□□□□ -0.55
UFD1-210ENST00000494054 TRPV1Q8NER1 839 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 LNPKQ9C0E8 428 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 NAPBQ9H115 298 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 GOPCQ9HD26 462 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 INCENPQ9NQS7 918 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 PPP1R9AQ9ULJ8 1098 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 PARP14Q460N5 1801 aa11.64□□□□□ -0.55
UFD1-210ENST00000494054 VWA5AO00534 786 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 STRNO43815 780 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 PPARAQ07869 468 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 AAMPQ13685 434 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 FAM47AQ5JRC9 791 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 MFSD14CQ5VZR4 134 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 DPP9Q86TI2 863 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 REPS2Q8NFH8 660 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 MKL1Q969V6 931 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 CEP95Q96GE4 821 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 MROH8Q9H579 483 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 MTMR4Q9NYA4 1195 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 NR2E3Q9Y5X4 410 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 TACC3Q9Y6A5 838 aa11.63□□□□□ -0.55
UFD1-210ENST00000494054 EVI5O60447 810 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 STAT3P40763 770 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 TFAP4Q01664 338 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 CTDSPL2Q05D32 466 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 RIOX2Q8IUF8 465 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 LRRC47Q8N1G4 583 aaKnown RBP11.62□□□□□ -0.55
UFD1-210ENST00000494054 NEDD1Q8NHV4 660 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 FAM227BQ96M60 508 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 RWDD1Q9H446 243 aaPredicted RBP11.62□□□□□ -0.55
UFD1-210ENST00000494054 C11orf49Q9H6J7 331 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 ZNF287Q9HBT7 754 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 ZNF214Q9UL59 606 aaPredicted RBP11.62□□□□□ -0.55
UFD1-210ENST00000494054 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
UFD1-210ENST00000494054 ALPK3Q96L96 1907 aa11.62□□□□□ -0.55
UFD1-210ENST00000494054 PFASO15067 1338 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 TRIOBPQ9H2D6 2365 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 SLC25A27O95847 323 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 COL6A1P12109 1028 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 FCER1AP12319 257 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 CNGA1P29973 690 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 PDE4BQ07343 736 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 ABRAQ8N0Z2 381 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 PRO3102Q9H379 93 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
UFD1-210ENST00000494054 DDX20Q9UHI6 824 aaKnown RBP11.61□□□□□ -0.55
UFD1-210ENST00000494054 PLIN4Q96Q06 1357 aa11.61□□□□□ -0.55
UFD1-210ENST00000494054 COL11A1P12107 1806 aaPredicted RBP11.6□□□□□ -0.55
UFD1-210ENST00000494054 ZNF236Q9UL36 1845 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 TTLL1O95922 423 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 PGK2P07205 417 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 SLC3A2P08195 630 aaKnown RBP11.6□□□□□ -0.55
UFD1-210ENST00000494054 TSPY3P0CV98 308 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 TSPY8P0CW00 308 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 CYBAP13498 195 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 FXR1P51114 621 aaKnown RBP eCLIP11.6□□□□□ -0.55
UFD1-210ENST00000494054 NUCB1Q02818 461 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 NMIQ13287 307 aaPredicted RBP11.6□□□□□ -0.55
UFD1-210ENST00000494054 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 SLFN13Q68D06 897 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 CHD1LQ86WJ1 897 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 C7orf61Q8IZ16 206 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 MAML3Q96JK9 1138 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 MMP19Q99542 508 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 RIPK3Q9Y572 518 aa11.6□□□□□ -0.55
UFD1-210ENST00000494054 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
UFD1-210ENST00000494054 NMT2O60551 498 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 FGAP02671 866 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 KCTD2Q14681 263 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 ALX1Q15699 326 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 MCMDC2Q4G0Z9 681 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 ZNF589Q86UQ0 364 aaPredicted RBP11.59□□□□□ -0.55
UFD1-210ENST00000494054 CPXCR1Q8N123 301 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
UFD1-210ENST00000494054 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 RILPL2Q969X0 211 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 KIFC2Q96AC6 838 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 CHMP4CQ96CF2 233 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms